RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 BHLHE22Q8NFJ8 381 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 OR2L5Q8NG80 312 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 OR7A2PQ8NGA2 310 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 BAHD1Q8TBE0 780 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 RSC1A1Q92681 617 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 PPCDCQ96CD2 204 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 MS4A6EQ96DS6 147 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 CCDC115Q96NT0 180 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 GBP5Q96PP8 586 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 KCNC2Q96PR1 638 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 CPPED1Q9BRF8 314 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 SORBS1Q9BX66 1292 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 SLC6A16Q9GZN6 736 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 AICDAQ9GZX7 198 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 ABCG4Q9H172 646 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 SYNPO2LQ9H987 977 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 EVA1BQ9NVM1 165 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 HRASLS2Q9NWW9 162 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 SLC25A37Q9NYZ2 338 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 VAPAQ9P0L0 249 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 STX18Q9P2W9 335 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 PILRAQ9UKJ1 303 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 FBXO4Q9UKT5 387 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 BTBD3Q9Y2F9 522 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 KLHL20Q9Y2M5 609 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 THADAQ6YHU6 1953 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 A0A0A6YYD5 115 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 PRSS51A0A1B0GVH4 220 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 GABRR3A8MPY1 467 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 H0Y3Z8 333 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 RTCAO00442 366 aaKnown RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 RFXANKO14593 260 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 PPM1DO15297 605 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 SDC3O75056 442 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 UBXN7O94888 489 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 SCELO95171 688 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 SERPIND1P05546 499 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 C8BP07358 591 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 IL3P08700 152 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ZCCHC18P0CG32 403 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 DDCP20711 480 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 HTR1EP28566 365 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 CDKN2CP42773 168 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 RXRGP48443 463 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 LSSP48449 732 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ARRB1P49407 418 aaPredicted RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 EPHA4P54764 986 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 MTPNP58546 118 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 RGS1Q08116 209 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TGM3Q08188 693 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 C2orf80Q0P641 193 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 SELPLGQ14242 412 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 HEPACAMQ14CZ8 416 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 DEFB133Q30KQ1 61 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 RUNDC3AQ59EK9 446 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TOR1AIP1Q5JTV8 583 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 C6orf132Q5T0Z8 1188 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 LCN8Q6JVE9 175 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ANKRD26P1Q6NSI1 321 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TRIM40Q6P9F5 258 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ABHD17CQ6PCB6 329 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 FIGLAQ6QHK4 219 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ANKRD46Q86W74 232 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ZNF761Q86XN6 746 aaPredicted RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 ZCCHC7Q8N3Z6 543 aaKnown RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 NATD1Q8N6N6 113 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ARL10Q8N8L6 244 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TMEM105Q8N8V8 129 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 GOLM1Q8NBJ4 401 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 VPS37AQ8NEZ2 397 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 SLC26A7Q8TE54 656 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 GAL3ST3Q96A11 431 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TM4SF19Q96DZ7 209 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ZC3H10Q96K80 434 aaKnown RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 TEFMQ96QE5 360 aaKnown RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 OR2A5Q96R48 311 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 PANX1Q96RD7 426 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ELF4Q99607 663 aaPredicted RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 KCTD14Q9BQ13 255 aaPredicted RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 ZFYVE21Q9BQ24 234 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 C17orf62Q9BQA9 187 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 INPP5KQ9BT40 448 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TBCDQ9BTW9 1192 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TRIM8Q9BZR9 551 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TRIM15Q9C019 465 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 PCDHAC1Q9H158 963 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 SEMA6CQ9H3T2 930 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 S100A14Q9HCY8 104 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 MIEF1Q9NQG6 463 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 UCKL1Q9NWZ5 548 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ACTR3BQ9P1U1 418 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 NKX1-2Q9UD57 310 aaPredicted RBP8.94□□□□□ -0.98
VPS52-216ENST00000471309 PILRBQ9UKJ0 227 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 ANGPTL2Q9UKU9 493 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 GMEB1Q9Y692 573 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 TMEM131Q92545 1883 aa8.94□□□□□ -0.98
VPS52-216ENST00000471309 FAM220BPB1ANY3 271 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 C4orf51C9J302 202 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ARPC2O15144 300 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms