RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MESP1Q9BRJ9 268 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 CRB3Q9BUF7 120 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 C12orf65Q9H3J6 166 aaKnown RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PARVBQ9HBI1 364 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 ZNF304Q9HCX3 659 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 NUDT4Q9NZJ9 180 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 CPSF2Q9P2I0 782 aaKnown RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 TSR3Q9UJK0 312 aaKnown RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 IKZF3Q9UKT9 509 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 ANKRD17O75179 2603 aaKnown RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 APCP25054 2843 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 TRAV17A0A0B4J275 112 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ARHGEF33A8MVX0 844 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 SUPT3HB4E1H0 165 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 G3V2L1 256 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 UBXN8O00124 270 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 POLR3GO15318 223 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 KLK8O60259 260 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 H2AFYO75367 372 aaKnown RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 SUPT3HO75486 399 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 MED26O95402 600 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 C1orf105O95561 183 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 S100BP04271 92 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 BPGMP07738 259 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 HIST1H2AGP0C0S8 130 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ZGLP1P0C6A0 271 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 PRR35P0CG20 571 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 COX6A1P12074 109 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 MTHFD2P13995 350 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 GFAPP14136 432 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 HIST1H2ADP20671 130 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ATP5F1P24539 256 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 MDH1P40925 334 aaKnown RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 TNFSF10P50591 281 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 RIPPLY3P57055 190 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 VSX2P58304 361 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ARG2P78540 354 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 OCA2Q04671 838 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 TGFBIQ15582 683 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 WASHC2DQ5SRD0 308 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 FRMPD2BQ6IN97 320 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 RNF44Q7L0R7 432 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 NUDCD3Q8IVD9 361 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 KBTBD2Q8IY47 623 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 TCAIMQ8N3R3 496 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 DTWD1Q8N5C7 304 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 C2orf73Q8N5S3 287 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 METTL27Q8N6F8 245 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 OR1N1Q8NGS0 311 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 RAB3IL1Q8TBN0 382 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ITLN2Q8WWU7 325 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 HAS2Q92819 552 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 RAD51AP1Q96B01 352 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 MIEF2Q96C03 454 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 HIST1H2AHQ96KK5 128 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 HIST1H2AJQ99878 128 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 H2AFJQ9BTM1 129 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 RNF32Q9H0A6 362 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ZNF160Q9HCG1 818 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 CD274Q9NZQ7 290 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ZNF282Q9UDV7 671 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-206ENST00000471037 CIDEBQ9UHD4 219 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 C3orf18Q9UK00 162 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 ADAMTS6Q9UKP5 1117 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 PDE10AQ9Y233 779 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 MAU2Q9Y6X3 613 aa8.6□□□□□ -1.03
SF3A1-206ENST00000471037 MDC1Q14676 2089 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 NSG1A0A0A6YYJ2 146 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 DYTNA2CJ06 578 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 HYKKA2RU49 373 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 OR2A25A4D2G3 310 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 A8MT66 165 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 STX16-NPEPL1H3BU86 382 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 MYO1CO00159 1063 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 STX16O14662 325 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 DLX3O60479 287 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 TRIM13O60858 407 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 SERPINA7P05543 415 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 ANXA5P08758 320 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 NEFHP12036 1026 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 GRNP28799 593 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 ALDH3A1P30838 453 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 PTGER4P35408 488 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 KCNC1P48547 511 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 HNMTP50135 292 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 EMP3P54852 163 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 ALDH18A1P54886 795 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 KCNK10P57789 538 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 DNAJB13P59910 316 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 NAA20P61599 178 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 NAA25Q14CX7 972 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 SETDB1Q15047 1291 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 PDK4Q16654 411 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 PHKG1Q16816 387 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 MUM1Q2TAK8 710 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 LIPMQ5VYY2 423 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 SULT1C3Q6IMI6 304 aa8.59□□□□□ -1.03
SF3A1-206ENST00000471037 METTL2BQ6P1Q9 378 aaKnown RBP8.59□□□□□ -1.03
SF3A1-206ENST00000471037 TTC23LQ6PF05 361 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms