RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SF1Q15637 639 aaKnown RBP6.36□□□□□ -1.39
VAMP3-202ENST00000470357 GSTA3Q16772 222 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 ZXDCQ2QGD7 858 aaPredicted RBP6.36□□□□□ -1.39
VAMP3-202ENST00000470357 KIF19Q2TAC6 998 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 INAVAQ3KP66 663 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 C14orf28Q4W4Y0 310 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 XKR7Q5GH72 579 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.36□□□□□ -1.39
VAMP3-202ENST00000470357 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
VAMP3-202ENST00000470357 SLC23A3Q6PIS1 610 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 SUSD1Q6UWL2 747 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 C6orf89Q6UWU4 347 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 LAYNQ6UX15 382 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 TMIGD1Q6UXZ0 262 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 ATG14Q6ZNE5 492 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 FAM214BQ7L5A3 538 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 MAVSQ7Z434 540 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 CLNKQ7Z7G1 428 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 MTDHQ86UE4 582 aaKnown RBP6.36□□□□□ -1.39
VAMP3-202ENST00000470357 C17orf82Q86X59 251 aaPredicted RBP6.36□□□□□ -1.39
VAMP3-202ENST00000470357 LAS2Q8IYD9 372 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 ARL10Q8N8L6 244 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 LMNTD1Q8N9Z9 388 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 PPFIBP2Q8ND30 876 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 OR4E2Q8NGC2 313 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 OR4K1Q8NGD4 311 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 OR2A1Q8NGT9 310 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 IL17FQ96PD4 163 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 CENPKQ9BS16 269 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 MRPS30Q9NP92 439 aaKnown RBP6.36□□□□□ -1.39
VAMP3-202ENST00000470357 TXLNGQ9NUQ3 528 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 TMEM184CQ9NVA4 438 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 NLGN3Q9NZ94 848 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 TAC3Q9UHF0 121 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 ZNF225Q9UK10 706 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 PLAGL1Q9UM63 463 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 MAPRE3Q9UPY8 281 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 TMED5Q9Y3A6 229 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 RNF11Q9Y3C5 154 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 TIMM22Q9Y584 194 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 SNX11Q9Y5W9 270 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 SLCO1B1Q9Y6L6 691 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 CAPN7Q9Y6W3 813 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 U3KQE9 123 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 ADAMTS9Q9P2N4 1935 aa6.36□□□□□ -1.39
VAMP3-202ENST00000470357 ARID1BQ8NFD5 2236 aaPredicted RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PCDH15Q96QU1 1955 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 KCNE1BA0A087WTH5 132 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 A0A1B0GTQ1 180 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 A0A1W2PPV9 198 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 TRBC2A0A5B9 178 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 FAM221AA4D161 298 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 OR5K3A6NET4 321 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ANKDD1BA6NHY2 528 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 RHPN2P1A8MT19 583 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 E9PBE3 544 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 FCHO1O14526 889 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 FFAR3O14843 346 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 GPR42O15529 346 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 NUDT21O43809 227 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PRICKLE3O43900 615 aaPredicted RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PCDHGA12O60330 932 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 KLHL41O60662 606 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 RSL1D1O76021 490 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 MYO1DO94832 1006 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PGRP06401 933 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 LINC00032P0C843 101 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PRR35P0CG20 571 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ZNF883P0CG24 379 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CDH1P12830 882 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CD59P13987 128 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ENGP17813 658 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 NCF2P19878 526 aaPredicted RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PTX3P26022 381 aaPredicted RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 EPHA8P29322 1005 aaPredicted RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PRDX6P30041 224 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 MRPL19P49406 292 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ARFIP1P53367 373 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 FOXA1P55317 472 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ERVK-8P63133 956 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 REEP5Q00765 189 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 EMX2Q04743 252 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 SF3A3Q12874 501 aaKnown RBP eCLIP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 TUBB3Q13509 450 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 PWP1Q13610 501 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 FASTKQ14296 549 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 SQLEQ14534 574 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 RPS6KA2Q15349 733 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 SLC5A12Q1EHB4 618 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 DEFB133Q30KQ1 61 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 HLA-BQ31612 363 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 LSM12Q3MHD2 195 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 SLC9B1Q4ZJI4 515 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 TRIM61Q5EBN2 209 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 VWA5B1Q5TIE3 1220 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 LARP4Q71RC2 724 aaKnown RBP eCLIP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ZFAND4Q86XD8 727 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 FAM129CQ86XR2 697 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ADGRF3Q8IZF5 1079 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CARFQ8N187 725 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms