RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ERI3O43414 337 aaKnown RBP14.03□□□□□ -0.16
COL9A3-209ENST00000469852 RAD1O60671 282 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 ULK1O75385 1050 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 CRCPO75575 148 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 KRT6AP02538 564 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 KRT6BP04259 564 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 SERPINB1P30740 379 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 KRT6CP48668 564 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 PLA2G16P53816 162 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 FOXL2P58012 376 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 MAT1AQ00266 395 aaKnown RBP14.03□□□□□ -0.16
COL9A3-209ENST00000469852 HMGCS1Q01581 520 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 SYT16Q17RD7 645 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 DEFB134Q4QY38 66 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 MANEAQ5SRI9 462 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 YOD1Q5VVQ6 348 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-209ENST00000469852 ATG16L1Q676U5 607 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 ABHD17CQ6PCB6 329 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 C6orf15Q6UXA7 325 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-209ENST00000469852 ZNF793Q6ZN11 406 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 COX15Q7KZN9 410 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 DTX1Q86Y01 620 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 TRIM42Q8IWZ5 723 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 CLYBLQ8N0X4 340 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 OR2L5Q8NG80 312 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 GAL3ST3Q96A11 431 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 ZNF578Q96N58 590 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-209ENST00000469852 QRFPRQ96P65 431 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 C17orf62Q9BQA9 187 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 ZNF717Q9BY31 904 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-209ENST00000469852 SLCO1B3Q9NPD5 702 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 TXLNGQ9NUQ3 528 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 THAP1Q9NVV9 213 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 ADGRE2Q9UHX3 823 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 HAO1Q9UJM8 370 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 RAP2CQ9Y3L5 183 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 NAALAD2Q9Y3Q0 740 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 SLC22A7Q9Y694 548 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 CCDC88CQ9P219 2028 aa14.02□□□□□ -0.16
COL9A3-209ENST00000469852 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 STMND1H3BQB6 276 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 PIP5K1BO14986 540 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 GALR3O60755 368 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 CNOT3O75175 753 aaKnown RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 RDH16O75452 317 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 SKAP2O75563 359 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 KLHL18O94889 574 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 HBQ1P09105 142 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 ALOX12P18054 663 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 STXBP1P61764 594 aaKnown RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 OLR1P78380 273 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 BTN3A2P78410 334 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 PHEXP78562 749 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 GUCY1A3Q02108 690 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 FAM53BQ14153 422 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 NDUFA9Q16795 377 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 FAM198BQ6UWH4 519 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 ZNF517Q6ZMY9 492 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 ARFGAP2Q8N6H7 521 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 OR5T3Q8NGG3 340 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 OR2T11Q8NH01 316 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 FAM76AQ8TAV0 307 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 PROKR1Q8TCW9 393 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 LRRC8CQ8TDW0 803 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 TWIST2Q8WVJ9 160 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 MMABQ96EY8 250 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 LRFN5Q96NI6 719 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 MRPL1Q9BYD6 325 aaKnown RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 CHST8Q9H2A9 424 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 PRDM7Q9NQW5 492 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 MARCOQ9UEW3 520 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-209ENST00000469852 PPT2Q9UMR5 302 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 SLC12A4Q9UP95 1085 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 CCL27Q9Y4X3 112 aa14.02□□□□□ -0.17
COL9A3-209ENST00000469852 DMXL2Q8TDJ6 3036 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 ZFYVE26Q68DK2 2539 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 PKD1L2Q7Z442 2459 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 CACNA1GO43497 2377 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 APC2O95996 2303 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 LOC101059948A0A1B0GTJ6 334 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 SERTM1A2A2V5 107 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 EEDO75530 441 aaKnown RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 NSA2O95478 260 aaKnown RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 LINC00032P0C843 101 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 PTX3P26022 381 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 CERS1P27544 350 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 CD82P27701 267 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 BSGP35613 385 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 GYS2P54840 703 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 ABHD18Q0P651 414 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 TBL3Q12788 808 aaKnown RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 CSTF3Q12996 717 aaKnown RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 SRSF6Q13247 344 aaKnown RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 CUL3Q13618 768 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 HERC3Q15034 1050 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 NKAIN1Q4KMZ8 207 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 FAM69BQ5VUD6 431 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 Q6ZSR9 355 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 FAM47EQ6ZV65 393 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 CHSY3Q70JA7 882 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms