RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SLC6A17Q9H1V8 727 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 LTB4R2Q9NPC1 389 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 ZNF225Q9UK10 706 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 PCOLCE2Q9UKZ9 415 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 MED16Q9Y2X0 877 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 DHRS7Q9Y394 339 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 HSPB11Q9Y547 144 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 INSL6Q9Y581 213 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 EI24O14681 340 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 PCCBP05166 539 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 FASP25445 335 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 S100A3P33764 101 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 CTSCP53634 463 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 SP140Q13342 867 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
USP11-206ENST00000469080 OR4F3Q6IEY1 312 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 TCEAL8Q8IYN2 117 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 TRMOQ9BU70 441 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 ALOXE3Q9BYJ1 711 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 LRTM1Q9HBL6 345 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 IFT46Q9NQC8 304 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 SPHK2Q9NRA0 654 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 ELOVL2Q9NXB9 296 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 ADGRE2Q9UHX3 823 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP11-206ENST00000469080 ASF1AQ9Y294 204 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 NYNRINQ9P2P1 1898 aaKnown RBP11.89□□□□□ -0.51
USP11-206ENST00000469080 IFRD1O00458 451 aaPredicted RBP11.89□□□□□ -0.51
USP11-206ENST00000469080 SLC31A1O15431 190 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 INMTO95050 263 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 RHDQ02161 417 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 EFR3AQ14156 821 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 TYW3Q6IPR3 259 aaKnown RBP11.89□□□□□ -0.51
USP11-206ENST00000469080 TMEM65Q6PI78 240 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 TPRG1Q6ZUI0 275 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 OR8H2Q8N162 312 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 OR5AK3PQ8NH89 298 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 ASPSCR1Q9BZE9 553 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 MEAF6Q9HAF1 191 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
USP11-206ENST00000469080 FAM92AA1XBS5 289 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 ACOT8O14734 319 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 ARPC2O15144 300 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 TIMP1P01033 207 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 ALBP02768 609 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 OPN1SWP03999 348 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 IL7RP16871 459 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 CR2P20023 1033 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 TACR1P25103 407 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 DNAJB1P25685 340 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 CAPGP40121 348 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 NCS1P62166 190 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 PCDH1Q08174 1060 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 PSRC1Q6PGN9 363 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 LACC1Q8IV20 430 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 KCNJ9Q92806 393 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 FOPNLQ96NB1 174 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 NUAK2Q9H093 628 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 CMTM6Q9NX76 183 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 TBX21Q9UL17 535 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 FAM186AA6NE01 2351 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 BET1O15155 118 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 GLAP06280 429 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 CTSAP10619 480 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 COX7A2P14406 83 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 DNAJB13P59910 316 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 KRR1Q13601 381 aaKnown RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 GTF2IRD2BQ6EKJ0 949 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 GTF2IRD2Q86UP8 949 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 RADILQ96JH8 1075 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 RIPOR3Q96MK2 946 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 FZD3Q9NPG1 666 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 MAP10Q9P2G4 905 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 DEC1Q9P2X7 70 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 SNX6Q9UNH7 406 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 VPS13AQ96RL7 3174 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 NCOR1O75376 2440 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 K7ESM1 405 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 RGS14O43566 566 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 HS6ST1O60243 411 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 CPNE6O95741 557 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 PAK4O96013 591 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 SLC7A1P30825 629 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 PTSQ03393 145 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 CHRNB3Q05901 458 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 ACSM2AQ08AH3 577 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 RFTN1Q14699 578 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 SLC36A3Q495N2 470 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 ACSM2BQ68CK6 577 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 ANKRD34AQ69YU3 496 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 ZNF517Q6ZMY9 492 aaPredicted RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 RAB43Q86YS6 212 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 SUSD6Q92537 303 aa11.88□□□□□ -0.51
USP11-206ENST00000469080 CNDP2Q96KP4 475 aaKnown RBP11.88□□□□□ -0.51
USP11-206ENST00000469080 MACROD1Q9BQ69 325 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms