RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 MITFO75030 526 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NIPSNAP2O75323 286 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SEC22BO75396 215 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 POP4O95707 220 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 TRUB2O95900 331 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NDUFB10O96000 172 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GLUD1P00367 558 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CST3P01034 146 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 IFNA10P01566 189 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 IL1AP01583 271 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CRYABP02511 175 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 C9P02748 559 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 LTFP02788 710 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MT-ND2P03891 347 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DNTTP04053 509 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 FGF2P09038 288 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CSF3P09919 207 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 HSMCR30P0CW71 290 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ODC1P11926 461 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF250P15622 560 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ARSBP15848 533 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 IL7RP16871 459 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GGT1P19440 569 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CAPN3P20807 821 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CBLP22681 906 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 IGFBP5P24593 272 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PSMA1P25786 263 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ARRB2P32121 409 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ADRA1BP35368 520 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 RGS6P49758 472 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 AKR1D1P51857 326 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MAP2K6P52564 334 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CACNB3P54284 484 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SUMO1P63165 101 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PSPHP78330 225 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 POU4F1Q01851 419 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CREMQ03060 361 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CSTF1Q05048 431 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CYP24A1Q07973 514 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF543Q08ER8 600 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MAP4K2Q12851 820 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 TP53BP2Q13625 1128 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 FGL2Q14314 439 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DMC1Q14565 340 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MAD2L1BPQ15013 274 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PGM5Q15124 567 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PCBP2Q15366 365 aaKnown RBP eCLIP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GUCA2BQ16661 112 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 KYAT1Q16773 422 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PPP1R3AQ16821 1122 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SLC35G1Q2M3R5 365 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CTU2Q2VPK5 515 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZIK1Q3SY52 487 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZACNQ401N2 412 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GLYR1Q49A26 553 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ATP13A5Q4VNC0 1218 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CDKL4Q5MAI5 379 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PDSS1Q5T2R2 415 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DDI2Q5TDH0 399 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 KIAA1614Q5VZ46 1190 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 LAMTOR1Q6IAA8 161 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 JADE1Q6IE81 842 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 FSTL4Q6MZW2 842 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 KIAA1211LQ6NV74 962 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 EFCAB12Q6NXP0 572 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CASC4Q6P4E1 433 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ERICH5Q6P6B1 374 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM107Q6UX40 140 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 RASSF6Q6ZTQ3 369 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 FAM92BQ6ZTR7 304 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CCDC149Q6ZUS6 474 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PDZD4Q76G19 769 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GPR142Q7Z601 462 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 FGD2Q7Z6J4 655 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PTAR1Q7Z6K3 402 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 B3GNT8Q7Z7M8 397 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM135Q86UB9 458 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CPNE8Q86YQ8 564 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PSTKQ8IV42 348 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DENND6AQ8IWF6 608 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NLGN4XQ8N0W4 816 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GPD1LQ8N335 351 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 TAB3Q8N5C8 712 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 EFHBQ8N7U6 833 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NKAIN3Q8N8D7 197 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DTX3Q8N9I9 347 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 IL17RCQ8NAC3 791 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GLB1L3Q8NCI6 653 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DENND6BQ8NEG7 585 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 OR4F6Q8NGB9 312 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 OR4A15Q8NGL6 344 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 OR2T11Q8NH01 316 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 AGR3Q8TD06 166 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DCAF4Q8WV16 495 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF606Q8WXB4 792 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NSMAFQ92636 917 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 OTUB1Q96FW1 271 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MSLNLQ96KJ4 702 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SGCZQ96LD1 299 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SPATA13Q96N96 652 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms