RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RPL35AP18077 110 aaKnown RBP4.43□□□□□ -1.7
LSM5-209ENST00000468872 UCP2P55851 309 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 YBEYP58557 167 aaPredicted RBP4.43□□□□□ -1.7
LSM5-209ENST00000468872 SGCGQ13326 291 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 CCDC6Q16204 474 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 ACKR1Q16570 336 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 IFI44LQ53G44 452 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 PTAR1Q7Z6K3 402 aaPredicted RBP4.43□□□□□ -1.7
LSM5-209ENST00000468872 KLHDC8BQ8IXV7 354 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 CLEC1AQ8NC01 280 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 FAM76AQ8TAV0 307 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 SMAP2Q8WU79 429 aaPredicted RBP4.43□□□□□ -1.7
LSM5-209ENST00000468872 ZNRF4Q8WWF5 429 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 C5orf30Q96GV9 206 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 FUCA2Q9BTY2 467 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 DPEP2Q9H4A9 486 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 EXOC1Q9NV70 894 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 HACD3Q9P035 362 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 GAB2Q9UQC2 676 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 WDR37Q9Y2I8 494 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 PYGO1Q9Y3Y4 419 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 TNS2Q63HR2 1409 aa4.43□□□□□ -1.7
LSM5-209ENST00000468872 A0A1W2PR80 420 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 HHLA1C9JL84 531 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 RTCAO00442 366 aaKnown RBP4.42□□□□□ -1.7
LSM5-209ENST00000468872 VEGFDO43915 354 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 CYTIPO60759 359 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 LETM1O95202 739 aaPredicted RBP4.42□□□□□ -1.7
LSM5-209ENST00000468872 MT-ND2P03891 347 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 MT-ND3P03897 115 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 GLI2P10070 1586 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 P4HA1P13674 534 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 SOX3P41225 446 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 XGP55808 180 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 SLC34A1Q06495 639 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 HNRNPDQ14103 355 aaKnown RBP4.42□□□□□ -1.7
LSM5-209ENST00000468872 PPA1Q15181 289 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 DUSP5Q16690 384 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 Q6ZSR9 355 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 LAX1Q8IWV1 398 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 TCEANCQ8N8B7 351 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 ATP6V0A1Q93050 837 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 FAM218AQ96MZ4 157 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 TDRD1Q9BXT4 1180 aaKnown RBP4.42□□□□□ -1.7
LSM5-209ENST00000468872 NYXQ9GZU5 481 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 ANGPTL3Q9Y5C1 460 aa4.42□□□□□ -1.7
LSM5-209ENST00000468872 A0A087WZ39 114 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 ZNF732B4DXR9 585 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 CACNB4O00305 520 aaPredicted RBP4.41□□□□□ -1.7
LSM5-209ENST00000468872 THEGLP0DJG4 465 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 PRKAR1AP10644 381 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 CEBPBP17676 345 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 ATP6V1E1P36543 226 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 SMSP52788 366 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 SLC3A1Q07837 685 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 CDH18Q13634 790 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 EFTUD2Q15029 972 aaKnown RBP eCLIP4.41□□□□□ -1.72e-6■■■■■ 33.5
LSM5-209ENST00000468872 STXBP2Q15833 593 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 FGD3Q5JSP0 725 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 BHLHB9Q6PI77 547 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 HOGA1Q86XE5 327 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 TMEM126BQ8IUX1 230 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 SERPINA12Q8IW75 414 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 LSMEM2Q8N112 164 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 RAB42Q8N4Z0 105 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 TMEM99Q8N816 258 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 ARL10Q8N8L6 244 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 PSMA8Q8TAA3 256 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 CD99L2Q8TCZ2 262 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 ARHGAP45Q92619 1136 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 ZNF486Q96H40 463 aaPredicted RBP4.41□□□□□ -1.7
LSM5-209ENST00000468872 LRR1Q96L50 414 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 TRIM7Q9C029 511 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 ZNF696Q9H7X3 374 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 MAGEF1Q9HAY2 307 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 CYP39A1Q9NYL5 469 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 AKAP7Q9P0M2 348 aaPredicted RBP4.41□□□□□ -1.7
LSM5-209ENST00000468872 APPL1Q9UKG1 709 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 POMT2Q9UKY4 750 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 SATB2Q9UPW6 733 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 ZNF510Q9Y2H8 683 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 TARBP1Q13395 1621 aaKnown RBP4.41□□□□□ -1.7
LSM5-209ENST00000468872 TEX14Q8IWB6 1497 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 NPHP3Q7Z494 1330 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 LRRC7Q96NW7 1537 aa4.41□□□□□ -1.7
LSM5-209ENST00000468872 A0A087X002 238 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 CCDC162PA2VCL2 907 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 GLTPD2A6NH11 291 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 SLCO1B7G3V0H7 640 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 M0R296 226 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 AADACP22760 399 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 CLCN4P51793 760 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 NR0B1P51843 470 aaKnown RBP4.4□□□□□ -1.71
LSM5-209ENST00000468872 PAX9P55771 341 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 ARF5P84085 180 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 GUCY2DQ02846 1103 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 CBX3Q13185 183 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms