RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	FLVCR1-AS1	Q8TAF5	88 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	AGR3	Q8TD06	166 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	SLC5A11	Q8WWX8	675 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	PYCR2	Q96C36	320 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	MOCOS	Q96EN8	888 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	PPP3R2	Q96LZ3	170 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	AIF1L	Q9BQI0	150 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	GPR87	Q9BY21	358 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	NUF2	Q9BZD4	464 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	SHCBP1L	Q9BZQ2	653 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	ELOVL6	Q9H5J4	265 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	BRF2	Q9HAW0	419 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	SAR1A	Q9NR31	198 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	ANKMY1	Q9P2S6	941 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	KCNMB2	Q9Y691	235 aa		11.51	□□□□□ -0.57
CTNS-205	ENST00000467663	TLN1	Q9Y490	2541 aa	Known RBP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	PPP6C	O00743	305 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	SDHD	O14521	159 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	MAP3K7	O43318	606 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	SUV39H1	O43463	412 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	CHRM5	P08912	532 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	PVR	P15151	417 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	ACPP	P15309	386 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	LBP	P18428	481 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	PRPH2	P23942	346 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	CMPK1	P30085	196 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	RORA	P35398	523 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	MRPL19	P49406	292 aa	Known RBP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	ATP4B	P51164	291 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	RELA	Q04206	551 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	CSTF3	Q12996	717 aa	Known RBP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	PDCD2	Q16342	344 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	GSTA3	Q16772	222 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	FBXO48	Q5FWF7	155 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	XKR7	Q5GH72	579 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	FRG2	Q64ET8	278 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	CLEC6A	Q6EIG7	209 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	MED27	Q6P2C8	311 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	NXPE4	Q6UWF7	544 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	MAVS	Q7Z434	540 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	DDIAS	Q8IXT1	998 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	TTL	Q8NG68	377 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	OR4K1	Q8NGD4	311 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	NEIL2	Q969S2	332 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	THOC1	Q96FV9	657 aa	Known RBP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	FRG2B	Q96QU4	278 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	OR2A14	Q96R47	310 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	OR4K3	Q96R72	315 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	EBF4	Q9BQW3	602 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	CHRNA10	Q9GZZ6	450 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	ACTL8	Q9H568	366 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	TMEM184C	Q9NVA4	438 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	ZFP69B	Q9UJL9	534 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	SERTAD3	Q9UJW9	196 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	POLH	Q9Y253	713 aa		11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	FARSA	Q9Y285	508 aa	Known RBP	11.5	□□□□□ -0.57
CTNS-205	ENST00000467663	KCNE1B	A0A087WTH5	132 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	CDC14C	A4D256	554 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	TMEM150C	B9EJG8	249 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	MEN1	O00255	615 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	FOXE1	O00358	373 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	MANBA	O00462	879 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PIP5K1B	O14986	540 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PRICKLE3	O43900	615 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SKAP2	O75563	359 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	RSL1D1	O76021	490 aa	Known RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	KLK3	P07288	261 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PRR35	P0CG20	571 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	UGT2B7	P16662	529 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PTPN4	P29074	926 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SERPINB3	P29508	390 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PRDX6	P30041	224 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	GRK3	P35626	688 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PIK3CB	P42338	1070 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	GABRA4	P48169	554 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	RASSF2	P50749	326 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	CCR8	P51685	355 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	RPS15	P62841	145 aa	Known RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	DOC2A	Q14183	400 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	KRT72	Q14CN4	511 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	ZRSR2	Q15696	482 aa	Known RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	UGT8	Q16880	541 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SLC5A12	Q1EHB4	618 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	LSM12	Q3MHD2	195 aa	Known RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SLC9B1	Q4ZJI4	515 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	ATP6AP1L	Q52LC2	224 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PRAMEF17	Q5VTA0	474 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	ICE2	Q659A1	982 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	CCDC121	Q6ZUS5	278 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	CHSY3	Q70JA7	882 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	PRICKLE2	Q7Z3G6	844 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	MYLK4	Q86YV6	388 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	LAS2	Q8IYD9	372 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	DSEL	Q8IZU8	1212 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	CPSF7	Q8N684	471 aa	Known RBP	11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	LMNTD1	Q8N9Z9	388 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	OR2A1	Q8NGT9	310 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms