RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 HYLS1Q96M11 299 aa17.39■□□□□ 0.37
SNAPC3-205ENST00000467062 NECTIN4Q96NY8 510 aa17.39■□□□□ 0.37
SNAPC3-205ENST00000467062 SMG9Q9H0W8 520 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-205ENST00000467062 ZFYVE1Q9HBF4 777 aa17.39■□□□□ 0.37
SNAPC3-205ENST00000467062 RASSF1Q9NS23 344 aa17.39■□□□□ 0.37
SNAPC3-205ENST00000467062 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
SNAPC3-205ENST00000467062 DHRS7Q9Y394 339 aa17.39■□□□□ 0.37
SNAPC3-205ENST00000467062 A0A0B4J293 547 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 HOXB1P14653 301 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 CACNG1Q06432 222 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 DBPQ10586 325 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 FOXD4Q12950 439 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 SLC35F1Q5T1Q4 408 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 ZFAND4Q86XD8 727 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 ZSWIM9Q86XI8 627 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 OR8H3Q8N146 312 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 CLHC1Q8NHS4 586 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 AP2M1Q96CW1 435 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 RNF31Q96EP0 1072 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 VPS9D1Q9Y2B5 631 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 OR51B4Q9Y5P0 310 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 V9GYH0 126 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 CHD5Q8TDI0 1954 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 TAPBPO15533 448 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 TNFRSF21O75509 655 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 HNF1BP35680 557 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 RGS6P49758 472 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 CLCN4P51793 760 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 RAB25P57735 213 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 MAB21L1Q13394 359 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 PAMR1Q6UXH9 720 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 DET1Q7L5Y6 550 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 KRT73Q86Y46 540 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 ENKURQ8TC29 256 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 MYLIPQ8WY64 445 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 MYO19Q96H55 970 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 TMEM175Q9BSA9 504 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 C1QTNF3Q9BXJ4 246 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 SRRQ9GZT4 340 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 TMEM245Q9H330 911 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 IFT22Q9H7X7 185 aa17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 ELF5Q9UKW6 265 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-205ENST00000467062 A0A1W2PRG6 482 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 TSC22D2O75157 780 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 WBP4O75554 376 aaKnown RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ABLIM3O94929 683 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 SLC2A4P14672 509 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 CHMP24386 653 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 STK19P49842 368 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 MRPL28Q13084 256 aaKnown RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 PWP1Q13610 501 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 GPR19Q15760 415 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 KIAA1614Q5VZ46 1190 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 MILR1Q7Z6M3 343 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 RNF130Q86XS8 419 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 KLHL6Q8WZ60 621 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ALG14Q96F25 216 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF382Q96SR6 550 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 SPNS1Q9H2V7 528 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 DIMT1Q9UNQ2 313 aaKnown RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 SCN5AQ14524 2016 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ARNTLO00327 626 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ATG13O75143 517 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 WDR47O94967 919 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 HOXD4P09016 255 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ALAS2P22557 587 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 AZGP1P25311 298 aaKnown RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 CTSOP43234 321 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 PER3P56645 1201 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 RPL38P63173 70 aaKnown RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ZNF33BQ06732 778 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 PON2Q15165 354 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 CHRNA6Q15825 494 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 CPZQ66K79 652 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 KDM4DQ6B0I6 523 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 C16orf62Q7Z3J2 963 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 HERVK_113Q902F9 699 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 COQ8BQ96D53 544 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 NUSAP1Q9BXS6 441 aaKnown RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 C11orf54Q9H0W9 315 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 LATS2Q9NRM7 1088 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ABCB8Q9NUT2 735 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 MBD1Q9UIS9 605 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 CASP8AP2Q9UKL3 1982 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 ANKRD36A6QL64 1941 aa17.37■□□□□ 0.37
SNAPC3-205ENST00000467062 CXCR6O00574 342 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 PI15O43692 258 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 GREM1O60565 184 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 B3GALNT1O75752 331 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 BPIP17213 487 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 DAPP51397 102 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 NFATC2Q13469 925 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 ZMAT1Q5H9K5 638 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 GPALPP1Q8IXQ4 340 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 PAK6Q9NQU5 681 aaPredicted RBP17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 RANBP2P49792 3224 aaKnown RBP17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 A0A096LPI6 279 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 ELOVL7A1L3X0 281 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 OR5K4A6NMS3 321 aa17.36■□□□□ 0.37
SNAPC3-205ENST00000467062 H7C0S8 307 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms