RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SIDT2Q8NBJ9 832 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 CLEC1AQ8NC01 280 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 RFT1Q96AA3 541 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 LRR1Q96L50 414 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 KRT12Q99456 494 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 PIGQQ9BRB3 760 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 FAM213AQ9BRX8 229 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 FSD1Q9BTV5 496 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 WWTR1Q9GZV5 400 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TMEM245Q9H330 911 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 THAP9Q9H5L6 903 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 PRMT8Q9NR22 394 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 ATAD3AQ9NVI7 634 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TRIM10Q9UDY6 481 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 ERVK-19Q9WJR5 959 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 KCNK6Q9Y257 313 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 EXOC6BQ9Y2D4 811 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TDRKHQ9Y2W6 561 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 TMED7Q9Y3B3 224 aa3.81□□□□□ -1.8
CDC42BPA-211ENST00000466538 DHX29Q7Z478 1369 aaKnown RBP3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 TRBV2A0A0J9YWF9 115 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 IQCMA0A1B0GVH7 501 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 C5orf51A6NDU8 294 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLC9B1P1A6NJY1 282 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 KRTAP29-1A8MX34 341 aaPredicted RBP3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZNF732B4DXR9 585 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 TCP10L2B9ZVM9 353 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 RNF103O00237 685 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 SYT7O43581 403 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 GSTA2P09210 222 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 FERP16591 822 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 CTNNA2P26232 953 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 TSFMP43897 325 aaKnown RBP3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 LBX1P52954 281 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 XGP55808 180 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 LCP2Q13094 533 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 CEACAM7Q14002 265 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 WLSQ5T9L3 541 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 TOM1L2Q6ZVM7 507 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 PTAR1Q7Z6K3 402 aaPredicted RBP3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 RABEPKQ7Z6M1 372 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 KLHDC8BQ8IXV7 354 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 FBXW8Q8N3Y1 598 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 OR6S1Q8NH40 331 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 GANCQ8TET4 914 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 SMAP2Q8WU79 429 aaPredicted RBP3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 PCDHB18PQ96TA0 734 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 HOXD1Q9GZZ0 328 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 MTHFD2LQ9H903 347 aaPredicted RBP3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 AKAP7Q9P0M2 348 aaPredicted RBP3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 IL19Q9UHD0 177 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 TEKT2Q9UIF3 430 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 TSPAN16Q9UKR8 245 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 POMT2Q9UKY4 750 aa3.8□□□□□ -1.8
CDC42BPA-211ENST00000466538 RPGRIP1LQ68CZ1 1315 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 hCG_38984A0A1B0GV85 526 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 SERINC4A6NH21 518 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 VEGFDO43915 354 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 IGLV1-44P01699 117 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 ANPEPP15144 967 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 ITGB6P18564 788 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 FEN1P39748 380 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 CCR4P51679 360 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 SNRPD1P62314 119 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 GPR50Q13585 617 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 HNRNPDQ14103 355 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 HLA-BQ31612 363 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 LRRC37A5PQ49AS3 106 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 KLHL22Q53GT1 634 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 B3GLCTQ6Y288 498 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 CHMP1BQ7LBR1 199 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZC3H3Q8IXZ2 948 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 SLC22A15Q8IZD6 547 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 ELMOD1Q8N336 334 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 SMYD1Q8NB12 490 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 CD99L2Q8TCZ2 262 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 RNASE8Q8TDE3 154 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 HAS2Q92819 552 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 C2orf48Q96LS8 159 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 NEDD4LQ96PU5 975 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 PRAM1Q96QH2 718 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 DDX50Q9BQ39 737 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 SPXQ9BT56 116 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 RBM4Q9BWF3 364 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 CLEC7AQ9BXN2 247 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 WDR13Q9H1Z4 485 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 MARCH7Q9H992 704 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 ANO10Q9NW15 660 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 DBF4Q9UBU7 674 aaPredicted RBP3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 GAB2Q9UQC2 676 aa3.79□□□□□ -1.8
CDC42BPA-211ENST00000466538 SYCE3A1L190 88 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 CCDC162PA2VCL2 907 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 CCSO14618 274 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 SURF4O15260 269 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 MLNRO43193 412 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 EPOP01588 193 aa3.78□□□□□ -1.8
CDC42BPA-211ENST00000466538 ZNF26P17031 533 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms