RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SMPD3Q9NY59 655 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 PCDHB11Q9Y5F2 797 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 OR1F1O43749 312 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 PRICKLE3O43900 615 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 PRSS23O95084 383 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 SNAP29O95721 258 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 CLIC3O95833 236 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 TDGQ13569 410 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 PDE7AQ13946 482 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 SKIV2LQ15477 1246 aaKnown RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 ANXA8L1Q5VT79 327 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 GPR155Q7Z3F1 870 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 TMEM145Q8NBT3 493 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 JPH3Q8WXH2 748 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 TPT1P8Q9HAU6 139 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 OLAHQ9NV23 265 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 RTCAO00442 366 aaKnown RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 KCNK5O95279 499 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 TFAP2AP05549 437 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 IGHV4-34P06331 123 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 ABCB1P08183 1280 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 CHRNB1P11230 501 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 GPX2P18283 190 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 PEBP1P30086 187 aaKnown RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 AKT2P31751 481 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 IST1P53990 364 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 SLC36A3Q495N2 470 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 LRRC23Q53EV4 343 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 ADCK2Q7Z695 626 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 PHF12Q96QT6 1004 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 MRPS26Q9BYN8 205 aaKnown RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 BHLHE41Q9C0J9 482 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 PITHD1Q9GZP4 211 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 SOX17Q9H6I2 414 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 KIR3DX1Q9H7L2 352 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 POLMQ9NP87 494 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 PNPLA3Q9NST1 481 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 SPHK1Q9NYA1 384 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 HEBP2Q9Y5Z4 205 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 C1orf226A1L170 272 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 RNASET2O00584 256 aaKnown RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 SEMA3DO95025 777 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 RASGRP1O95267 797 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 IL3P08700 152 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 BSGP35613 385 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 C16orf72Q14CZ0 275 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 PRSS53Q2L4Q9 553 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 MPEG1Q2M385 716 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 ALG11Q2TAA5 492 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 Q6ZSR6 202 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 GALNT10Q86SR1 603 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 STK32CQ86UX6 486 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 MMP21Q8N119 569 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 FBXL20Q96IG2 436 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 SLC6A20Q9NP91 592 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 AHSPQ9NZD4 102 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 ZNF624Q9P2J8 865 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-205ENST00000466192 CYP8B1Q9UNU6 501 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 COLEC10Q9Y6Z7 277 aa17.45■□□□□ 0.38
COL9A3-205ENST00000466192 TDRD6O60522 2096 aaKnown RBP17.44■□□□□ 0.38
COL9A3-205ENST00000466192 GNGT2O14610 69 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 TNFRSF10CO14798 259 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 CCNDBP1O95273 360 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 H6PDO95479 791 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 IGLV3-19P01714 112 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 NTRK1P04629 796 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 SERPINB1P30740 379 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 ACTR1BP42025 376 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 ARSFP54793 590 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 SRP54P61011 504 aaKnown RBP17.44■□□□□ 0.38
COL9A3-205ENST00000466192 ACTR1AP61163 376 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 YPEL5P62699 121 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 GAB1Q13480 694 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 SMAD2Q15796 467 aaKnown RBP17.44■□□□□ 0.38
COL9A3-205ENST00000466192 VMACQ2NL98 169 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 CYBRD1Q53TN4 286 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 WASH2PQ6VEQ5 465 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 R3HCC1LQ7Z5L2 792 aaKnown RBP17.44■□□□□ 0.38
COL9A3-205ENST00000466192 DHRSXQ8N5I4 330 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 OR4A15Q8NGL6 344 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 CIDECQ96AQ7 238 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-205ENST00000466192 PPCDCQ96CD2 204 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 PYURFQ96I23 114 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 LHX9Q9NQ69 397 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 DNAJB9Q9UBS3 223 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 PCOLCE2Q9UKZ9 415 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 MYRFQ9Y2G1 1151 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 HS3ST3A1Q9Y663 406 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 KNL1Q8NG31 2342 aa17.44■□□□□ 0.38
COL9A3-205ENST00000466192 GON4LQ3T8J9 2241 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 ZNF682O95780 498 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 CLCN2P51788 898 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 DGKEP52429 567 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 VAC14Q08AM6 782 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 PPP1R8Q12972 351 aaKnown RBP17.43■□□□□ 0.38
COL9A3-205ENST00000466192 CCNYL2Q5T2Q4 361 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 PTOV1Q86YD1 416 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 ZDHHC13Q8IUH4 622 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 ZZZ3Q8IYH5 903 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 ADGRF3Q8IZF5 1079 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms