RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CLDN9O95484 217 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 TGFB1P01137 390 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 CPA3P15088 417 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 OLR1P78380 273 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 BTN3A2P78410 334 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 CLCQ05315 142 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 KLC1Q07866 573 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 TRAF3Q13114 568 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 ZRSR2Q15696 482 aaKnown RBP11.72□□□□□ -0.53
CHPF2-202ENST00000465601 LINC00303Q3SY05 128 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 RAB43Q86YS6 212 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 CCNYL1Q8N7R7 359 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 TTC9Q92623 222 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 MS4A6EQ96DS6 147 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 APOPT1Q96IL0 206 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 SMC6Q96SB8 1091 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 REXO4Q9GZR2 422 aaKnown RBP11.72□□□□□ -0.53
CHPF2-202ENST00000465601 IQCGQ9H095 443 aaKnown RBP11.72□□□□□ -0.53
CHPF2-202ENST00000465601 MKKSQ9NPJ1 570 aaPredicted RBP11.72□□□□□ -0.53
CHPF2-202ENST00000465601 NXT1Q9UKK6 140 aaKnown RBP11.72□□□□□ -0.53
CHPF2-202ENST00000465601 MAN2B2Q9Y2E5 1009 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 PCDHGA11Q9Y5H2 935 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 PCSK5Q92824 1860 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 BOD1L1Q8NFC6 3051 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 CROCCQ5TZA2 2017 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 H0YIV9 168 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 CTIFO43310 598 aaKnown RBP11.71□□□□□ -0.53
CHPF2-202ENST00000465601 CHST10O43529 356 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 BMP10O95393 424 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 OTCP00480 354 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 ITGB2P05107 769 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 XCR1P46094 333 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 NEK2P51955 445 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 PLA2G16P53816 162 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 EMP2P54851 167 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 ADPRMQ3LIE5 342 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 FAM219BQ5XKK7 198 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 BORAQ6PGQ7 559 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 LRIG3Q6UXM1 1119 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 PPP1R32Q7Z5V6 425 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 ZC3H7AQ8IWR0 971 aaKnown RBP11.71□□□□□ -0.53
CHPF2-202ENST00000465601 ARMC2Q8NEN0 867 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 OR4F6Q8NGB9 312 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 HUS1BQ8NHY5 278 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 TCP10LQ8TDR4 215 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 THAP4Q8WY91 577 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 GAL3ST3Q96A11 431 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 MTFMTQ96DP5 389 aaKnown RBP11.71□□□□□ -0.53
CHPF2-202ENST00000465601 CCDC126Q96EE4 140 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 L3HYPDHQ96EM0 354 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 PEX11GQ96HA9 241 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 FAR2Q96K12 515 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 FAM111AQ96PZ2 611 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 MTERF1Q99551 399 aaKnown RBP11.71□□□□□ -0.53
CHPF2-202ENST00000465601 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 MS4A8Q9BY19 250 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 TGIF2Q9GZN2 237 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 OR51B5Q9H339 312 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 MKS1Q9NXB0 559 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 SLC17A7Q9P2U7 560 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 ADGRE2Q9UHX3 823 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 C3orf18Q9UK00 162 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 KCNMB2Q9Y691 235 aa11.71□□□□□ -0.53
CHPF2-202ENST00000465601 NUP210LQ5VU65 1888 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 OR2W5A6NFC9 320 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 ARGFXA6NJG6 315 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 SAP18O00422 153 aaKnown RBP11.7□□□□□ -0.54
CHPF2-202ENST00000465601 KALRNO60229 2985 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 OR4F21O95013 312 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 HEXBP07686 556 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 MMP11P24347 488 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 SERPINB1P30740 379 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 HPDP32754 393 aaPredicted RBP11.7□□□□□ -0.54
CHPF2-202ENST00000465601 PIK3CBP42338 1070 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 CCR10P46092 362 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 NAGLUP54802 743 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 RPS13P62277 151 aaKnown RBP11.7□□□□□ -0.54
CHPF2-202ENST00000465601 SKP1P63208 163 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 CHAF1BQ13112 559 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 ATP1A4Q13733 1029 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 RUNX2Q13950 521 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 SGO1Q5FBB7 561 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 DEPDC1Q5TB30 811 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 MFSD4BQ5TF39 518 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 TTC19Q6DKK2 380 aaPredicted RBP11.7□□□□□ -0.54
CHPF2-202ENST00000465601 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 NIPAL1Q6NVV3 410 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 LETMD1Q6P1Q0 360 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 TRIM40Q6P9F5 258 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 ABHD17CQ6PCB6 329 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 CHSY3Q70JA7 882 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 UBE3DQ7Z6J8 389 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 MRGPREQ86SM8 312 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 EXOC3L1Q86VI1 746 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 C10orf107Q8IVU9 208 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 OR2L5Q8NG80 312 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 WDR20Q8TBZ3 569 aa11.7□□□□□ -0.54
CHPF2-202ENST00000465601 RDH11Q8TC12 318 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms