RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RAB43Q86YS6 212 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 MYLK4Q86YV6 388 aaPredicted RBP19.23■□□□□ 0.67
SKA3-205ENST00000465471 OR2L5Q8NG80 312 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 OR4F6Q8NGB9 312 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 HUS1BQ8NHY5 278 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 CCT6BQ92526 530 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 MIEF2Q96C03 454 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 PGM2Q96G03 612 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 QRFPRQ96P65 431 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 SMC6Q96SB8 1091 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 REXO4Q9GZR2 422 aaKnown RBP19.23■□□□□ 0.67
SKA3-205ENST00000465471 GSTO2Q9H4Y5 243 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 SOX17Q9H6I2 414 aaPredicted RBP19.23■□□□□ 0.67
SKA3-205ENST00000465471 OXSMQ9NWU1 459 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 HCN3Q9P1Z3 774 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 PPT2Q9UMR5 302 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 FAM208BQ5VWN6 2430 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 ZNF860A6NHJ4 632 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 SUPT7LO94864 414 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 BMP10O95393 424 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 PCNAP12004 261 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 CPA3P15088 417 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 MMP11P24347 488 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 EFNA3P52797 238 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 PCLAFQ15004 111 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 ZRSR2Q15696 482 aaKnown RBP19.22■□□□□ 0.67
SKA3-205ENST00000465471 CPSF6Q16630 551 aaKnown RBP eCLIP19.22■□□□□ 0.67
SKA3-205ENST00000465471 LINC00303Q3SY05 128 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 LETMD1Q6P1Q0 360 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 ABHD17CQ6PCB6 329 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 MRGPREQ86SM8 312 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 OR5T3Q8NGG3 340 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 OR51Q1Q8NH59 317 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 TRPC4APQ8TEL6 797 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 ATP6V1E2Q96A05 226 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 REPS1Q96D71 796 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 MAGEB10Q96LZ2 347 aaPredicted RBP19.22■□□□□ 0.67
SKA3-205ENST00000465471 ZNF382Q96SR6 550 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 SSU72Q9NP77 194 aaKnown RBP19.22■□□□□ 0.67
SKA3-205ENST00000465471 DMRT3Q9NQL9 472 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 ACSS2Q9NR19 701 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 SEMA3GQ9NS98 782 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 PSD3Q9NYI0 1048 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 TRPS1Q9UHF7 1281 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 MID2Q9UJV3 735 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 KCNMB2Q9Y691 235 aa19.22■□□□□ 0.67
SKA3-205ENST00000465471 ERI3O43414 337 aaKnown RBP19.21■□□□□ 0.67
SKA3-205ENST00000465471 DNAJB6O75190 326 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 SPAG7O75391 227 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 TSPAN8P19075 237 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 XCR1P46094 333 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 NAA20P61599 178 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 RBBP7Q16576 425 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 DEFB109BQ30KR1 87 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 TMEM35AQ53FP2 167 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 C10orf62Q5T681 223 aaPredicted RBP19.21■□□□□ 0.67
SKA3-205ENST00000465471 BORAQ6PGQ7 559 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 SHISA6Q6ZSJ9 500 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 MED25Q71SY5 747 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 UBE3DQ7Z6J8 389 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 MILR1Q7Z6M3 343 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 EXOC3L1Q86VI1 746 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 LAPTM4BQ86VI4 370 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 ARMC2Q8NEN0 867 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 MYRIPQ8NFW9 859 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 TCP10LQ8TDR4 215 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 EXTL1Q92935 676 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 CMTM7Q96FZ5 175 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 WBP1Q96G27 269 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 IP6K3Q96PC2 410 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 FAM111AQ96PZ2 611 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 OR1F2PQ96R84 312 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 F2RL3Q96RI0 385 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 UBL7Q96S82 380 aaPredicted RBP19.21■□□□□ 0.67
SKA3-205ENST00000465471 IQCGQ9H095 443 aaKnown RBP19.21■□□□□ 0.67
SKA3-205ENST00000465471 SLC17A7Q9P2U7 560 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 ACTL7BQ9Y614 415 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 HS3ST3B1Q9Y662 390 aa19.21■□□□□ 0.67
SKA3-205ENST00000465471 FOXE1O00358 373 aaPredicted RBP19.2■□□□□ 0.66
SKA3-205ENST00000465471 SOCS6O14544 535 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 SCELO95171 688 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 MLYCDO95822 493 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 IGHEP01854 428 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 CYC1P08574 325 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 IL10P22301 178 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 OTX2P32243 289 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 LCP2Q13094 533 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 ATP1A4Q13733 1029 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 DEPDC1Q5TB30 811 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 KHDRBS2Q5VWX1 349 aaKnown RBP19.2■□□□□ 0.66
SKA3-205ENST00000465471 LIPMQ5VYY2 423 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 FRG2Q64ET8 278 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 TRIM40Q6P9F5 258 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 FRMD7Q6ZUT3 714 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 APLFQ8IW19 511 aaPredicted RBP19.2■□□□□ 0.66
SKA3-205ENST00000465471 RNF175Q8N4F7 328 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 PPP4R1Q8TF05 950 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 FRG2BQ96QU4 278 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 MTERF1Q99551 399 aaKnown RBP19.2■□□□□ 0.66
SKA3-205ENST00000465471 CRB3Q9BUF7 120 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms