RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 METTL2AQ96IZ6 378 aaKnown RBP13.25□□□□□ -0.29
HDAC6-215ENST00000465457 CDK15Q96Q40 435 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 TIMM29Q9BSF4 260 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ELOVL6Q9H5J4 265 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 PRDM8Q9NQV8 689 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 GID8Q9NWU2 228 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 CCDC167Q9P0B6 97 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 STOX2Q9P2F5 926 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-215ENST00000465457 SLC7A8Q9UHI5 535 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 MOSPD1Q9UJG1 213 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ACSL5Q9ULC5 683 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 EIF3LQ9Y262 564 aaKnown RBP13.25□□□□□ -0.29
HDAC6-215ENST00000465457 TMED5Q9Y3A6 229 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 ZFHX3Q15911 3703 aa13.25□□□□□ -0.29
HDAC6-215ENST00000465457 IGHV1OR21-1A0A087WYE8 117 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 A8MUI8 341 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 LSM1O15116 133 aaKnown RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 PPM1DO15297 605 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 FKBP6O75344 327 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 SLC22A3O75751 556 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 RSL1D1O76021 490 aaKnown RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 C1orf105O95561 183 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 NPPAP01160 153 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 FUCA1P04066 466 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 HSD3B1P14060 373 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 TCN2P20062 427 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 HSD3B2P26439 372 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 CSTF2P33240 577 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 GNPDA1P46926 289 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 KIAA1024LP59773 190 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 CSTF3Q12996 717 aaKnown RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 MRPL49Q13405 166 aaKnown RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 RCAN2Q14206 197 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 DCAF12Q5T6F0 453 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 CACHD1Q5VU97 1274 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 REP15Q6BDI9 236 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 CAPN13Q6MZZ7 669 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 TCTN3Q6NUS6 607 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 CRTC3Q6UUV7 619 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 Q6ZSR9 355 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 MAMDC2Q7Z304 686 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 THOC6Q86W42 341 aaKnown RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 GLB1L3Q8NCI6 653 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 OR4D9Q8NGE8 314 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 HMGCLL1Q8TB92 370 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 KIAA1143Q96AT1 154 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 REPS1Q96D71 796 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 TCTN2Q96GX1 697 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 ZBTB18Q99592 522 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 ZNF490Q9ULM2 529 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 PTGDR2Q9Y5Y4 395 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 KCNE2Q9Y6J6 123 aa13.24□□□□□ -0.29
HDAC6-215ENST00000465457 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.24□□□□□ -0.29
HDAC6-215ENST00000465457 PRSS38A1L453 326 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 FAM234BA2RU67 622 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 B4E171 279 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 CACNB4O00305 520 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-215ENST00000465457 NR5A2O00482 541 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 CAPN5O15484 640 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-215ENST00000465457 GNAZP19086 355 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 EPORP19235 508 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 KELP23276 732 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 JAK1P23458 1154 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 IMPA1P29218 277 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 TSPAN7P41732 249 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 CASP2P42575 452 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 IRF8Q02556 426 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 PRKG2Q13237 762 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 LRP8Q14114 963 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 KPNB1Q14974 876 aaKnown RBP13.23□□□□□ -0.29
HDAC6-215ENST00000465457 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 ABRAXAS2Q15018 415 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 EIF2S3LQ2VIR3 472 aaKnown RBP13.23□□□□□ -0.29
HDAC6-215ENST00000465457 AP5B1Q2VPB7 878 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 NADK2Q4G0N4 442 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 SNAP47Q5SQN1 464 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 C1QL3Q5VWW1 255 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 GRHL2Q6ISB3 625 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 AAGABQ6PD74 315 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 BLOC1S3Q6QNY0 202 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 C11orf96Q7Z7L8 435 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 MYLK4Q86YV6 388 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-215ENST00000465457 DCUN1D3Q8IWE4 304 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 NAGSQ8N159 534 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 SFRP1Q8N474 314 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 RAB42Q8N4Z0 105 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 EFCAB3Q8N7B9 438 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 OR2T11Q8NH01 316 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 RAD51AP1Q96B01 352 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 PKP4Q99569 1192 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 HOPXQ9BPY8 73 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-215ENST00000465457 ASPSCR1Q9BZE9 553 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 OR52A5Q9H2C5 316 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 EHD1Q9H4M9 534 aa13.23□□□□□ -0.29
HDAC6-215ENST00000465457 SPAG4Q9NPE6 437 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms