RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 SLC6A16Q9GZN6 736 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 SPNS1Q9H2V7 528 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 PELI2Q9HAT8 420 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 PRDM9Q9NQV7 894 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 DYRK1BQ9Y463 629 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 SAGE2PA6NJ88 616 aa21.32■■□□□ 1
USP42-205ENST00000465073 PSMD12O00232 456 aaPredicted RBP21.32■■□□□ 1
USP42-205ENST00000465073 CLDN14O95500 239 aa21.32■■□□□ 1
USP42-205ENST00000465073 ZNF24P17028 368 aa21.32■■□□□ 1
USP42-205ENST00000465073 TRHRP34981 398 aaPredicted RBP21.32■■□□□ 1
USP42-205ENST00000465073 PGGT1BP53609 377 aa21.32■■□□□ 1
USP42-205ENST00000465073 REEP5Q00765 189 aa21.32■■□□□ 1
USP42-205ENST00000465073 SBSNQ6UWP8 590 aa21.32■■□□□ 1
USP42-205ENST00000465073 ANKRD53Q8N9V6 530 aa21.32■■□□□ 1
USP42-205ENST00000465073 ARMC2Q8NEN0 867 aa21.32■■□□□ 1
USP42-205ENST00000465073 TMEM125Q96AQ2 219 aa21.32■■□□□ 1
USP42-205ENST00000465073 TRIM8Q9BZR9 551 aa21.32■■□□□ 1
USP42-205ENST00000465073 PLAC1Q9HBJ0 212 aa21.32■■□□□ 1
USP42-205ENST00000465073 SLC17A6Q9P2U8 582 aa21.32■■□□□ 1
USP42-205ENST00000465073 IGKV3D-11A0A0A0MRZ8 115 aa21.32■■□□□ 1
USP42-205ENST00000465073 TCRBV16S1A1N1A0A5B0 115 aa21.32■■□□□ 1
USP42-205ENST00000465073 CES2O00748 559 aa21.32■■□□□ 1
USP42-205ENST00000465073 SMIM10L1P0DMW3 83 aa21.32■■□□□ 1
USP42-205ENST00000465073 POU3F2P20265 443 aaPredicted RBP21.32■■□□□ 1
USP42-205ENST00000465073 MAOAP21397 527 aa21.32■■□□□ 1
USP42-205ENST00000465073 HNF4AP41235 474 aa21.32■■□□□ 1
USP42-205ENST00000465073 HLCSP50747 726 aa21.32■■□□□ 1
USP42-205ENST00000465073 RAB8AP61006 207 aa21.32■■□□□ 1
USP42-205ENST00000465073 NXPE4Q6UWF7 544 aa21.32■■□□□ 1
USP42-205ENST00000465073 THOC6Q86W42 341 aaKnown RBP21.32■■□□□ 1
USP42-205ENST00000465073 ZNF227Q86WZ6 799 aa21.32■■□□□ 1
USP42-205ENST00000465073 ARMC10Q8N2F6 343 aa21.32■■□□□ 1
USP42-205ENST00000465073 NFAM1Q8NET5 270 aaPredicted RBP21.32■■□□□ 1
USP42-205ENST00000465073 AGAP11Q8TF27 550 aa21.32■■□□□ 1
USP42-205ENST00000465073 SLCO2A1Q92959 643 aa21.32■■□□□ 1
USP42-205ENST00000465073 SMIM10Q96HG1 83 aa21.32■■□□□ 1
USP42-205ENST00000465073 KCNE2Q9Y6J6 123 aa21.32■■□□□ 1
USP42-205ENST00000465073 NCOA6Q14686 2063 aaPredicted RBP21.31■■□□□ 1
USP42-205ENST00000465073 FCHO1O14526 889 aa21.31■■□□□ 1
USP42-205ENST00000465073 SERPINA6P08185 405 aa21.31■■□□□ 1
USP42-205ENST00000465073 HYAL2Q12891 473 aa21.31■■□□□ 1
USP42-205ENST00000465073 RNFT1Q5M7Z0 435 aa21.31■■□□□ 1
USP42-205ENST00000465073 DOLPP1Q86YN1 238 aa21.31■■□□□ 1
USP42-205ENST00000465073 EID3Q8N140 333 aa21.31■■□□□ 1
USP42-205ENST00000465073 PDIK1LQ8N165 341 aa21.31■■□□□ 1
USP42-205ENST00000465073 POGLUT1Q8NBL1 392 aa21.31■■□□□ 1
USP42-205ENST00000465073 PHF10Q8WUB8 498 aaKnown RBP21.31■■□□□ 1
USP42-205ENST00000465073 ANKRD7Q92527 254 aa21.31■■□□□ 1
USP42-205ENST00000465073 DEFB126Q9BYW3 111 aa21.31■■□□□ 1
USP42-205ENST00000465073 ZFATQ9P243 1243 aa21.31■■□□□ 1
USP42-205ENST00000465073 DCHS2Q6V1P9 2916 aa21.3■■□□□ 1
USP42-205ENST00000465073 E9PLN8 166 aa21.3■■□□□ 1
USP42-205ENST00000465073 PRRG2O14669 202 aa21.3■■□□□ 1
USP42-205ENST00000465073 RBBP5Q15291 538 aaKnown RBP21.3■■□□□ 1
USP42-205ENST00000465073 CDSNQ15517 529 aa21.3■■□□□ 1
USP42-205ENST00000465073 PPP1R3AQ16821 1122 aa21.3■■□□□ 1
USP42-205ENST00000465073 CHERPQ8IWX8 916 aaKnown RBP21.3■■□□□ 1
USP42-205ENST00000465073 ZNF295-AS1Q8N0V1 137 aa21.3■■□□□ 1
USP42-205ENST00000465073 SLC35F6Q8N357 371 aa21.3■■□□□ 1
USP42-205ENST00000465073 CPSF7Q8N684 471 aaKnown RBP21.3■■□□□ 1
USP42-205ENST00000465073 CFAP36Q96G28 342 aa21.3■■□□□ 1
USP42-205ENST00000465073 VKORC1Q9BQB6 163 aa21.3■■□□□ 1
USP42-205ENST00000465073 RHBGQ9H310 441 aa21.3■■□□□ 1
USP42-205ENST00000465073 KLHL31Q9H511 634 aa21.3■■□□□ 1
USP42-205ENST00000465073 NECTIN3Q9NQS3 549 aa21.3■■□□□ 1
USP42-205ENST00000465073 IKZF3Q9UKT9 509 aa21.3■■□□□ 1
USP42-205ENST00000465073 SNX12Q9UMY4 172 aa21.3■■□□□ 1
USP42-205ENST00000465073 SLC22A14Q9Y267 594 aa21.3■■□□□ 1
USP42-205ENST00000465073 KLF13Q9Y2Y9 288 aaPredicted RBP21.3■■□□□ 1
USP42-205ENST00000465073 CTAGE15A4D2H0 777 aa21.29■■□□□ 1
USP42-205ENST00000465073 IVDP26440 423 aa21.29■■□□□ 1
USP42-205ENST00000465073 SSTR2P30874 369 aa21.29■■□□□ 1
USP42-205ENST00000465073 ELK3P41970 407 aa21.29■■□□□ 1
USP42-205ENST00000465073 ITGA8P53708 1063 aa21.29■■□□□ 1
USP42-205ENST00000465073 HSF1Q00613 529 aa21.29■■□□□ 1
USP42-205ENST00000465073 HP1BP3Q5SSJ5 553 aaPredicted RBP21.29■■□□□ 1
USP42-205ENST00000465073 TRMT10BQ6PF06 316 aaKnown RBP21.29■■□□□ 1
USP42-205ENST00000465073 TMPRSS11BQ86T26 416 aa21.29■■□□□ 1
USP42-205ENST00000465073 CTAGE6Q86UF2 777 aa21.29■■□□□ 1
USP42-205ENST00000465073 CREB3L4Q8TEY5 395 aa21.29■■□□□ 1
USP42-205ENST00000465073 LRRC39Q96DD0 335 aa21.29■■□□□ 1
USP42-205ENST00000465073 DDX47Q9H0S4 455 aaKnown RBP21.29■■□□□ 1
USP42-205ENST00000465073 MMACHCQ9Y4U1 282 aa21.29■■□□□ 1
USP42-205ENST00000465073 ASB1Q9Y576 335 aa21.29■■□□□ 1
USP42-205ENST00000465073 TACC2O95359 2948 aa21.29■■□□□ 1
USP42-205ENST00000465073 KLRC4-KLRK1H3BQV0 150 aa21.28■■□□□ 1
USP42-205ENST00000465073 C19orf84I3L1E1 186 aa21.28■■□□□ 1
USP42-205ENST00000465073 ZNF37AP17032 561 aaPredicted RBP21.28■■□□□ 1
USP42-205ENST00000465073 STXBP1P61764 594 aaKnown RBP21.28■■□□□ 1
USP42-205ENST00000465073 CDKL1Q00532 357 aa21.28■■□□□ 1
USP42-205ENST00000465073 FRG1Q14331 258 aaKnown RBP21.28■■□□□ 1
USP42-205ENST00000465073 MORF4L2Q15014 288 aa21.28■■□□□ 1
USP42-205ENST00000465073 TOR1AIP1Q5JTV8 583 aa21.28■■□□□ 1
USP42-205ENST00000465073 STEAP4Q687X5 459 aa21.28■■□□□ 1
USP42-205ENST00000465073 CA13Q8N1Q1 262 aa21.28■■□□□ 1
USP42-205ENST00000465073 NKAPQ8N5F7 415 aaKnown RBP21.28■■□□□ 1
USP42-205ENST00000465073 B3GNT7Q8NFL0 401 aa21.28■■□□□ 1
USP42-205ENST00000465073 CHMP2BQ9UQN3 213 aa21.28■■□□□ 1
USP42-205ENST00000465073 A8MUA0 341 aa21.27■■□□□ 1
USP42-205ENST00000465073 KIR3DL1P43629 444 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms