RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CCDC51Q96ER9 411 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 DTD2Q96FN9 168 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 C18orf12Q96KH6 178 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 RBM14Q96PK6 669 aaKnown RBP3.62□□□□□ -1.83
ITGB1-208ENST00000464001 SYT15Q9BQS2 421 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 ZSCAN5AQ9BUG6 496 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 C1QTNF1Q9BXJ1 281 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 FGFBP2Q9BYJ0 223 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 RTN4RQ9BZR6 473 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 S1PR5Q9H228 398 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 AKIRIN1Q9H9L7 192 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-208ENST00000464001 RPF1Q9H9Y2 349 aaKnown RBP3.62□□□□□ -1.83
ITGB1-208ENST00000464001 PELI2Q9HAT8 420 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 TRPV5Q9NQA5 729 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 PNPLA3Q9NST1 481 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 ZMAT5Q9UDW3 170 aaKnown RBP3.62□□□□□ -1.83
ITGB1-208ENST00000464001 GAGE2DQ9UEU5 116 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 HACL1Q9UJ83 578 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 PLEKHA6Q9Y2H5 1048 aa3.62□□□□□ -1.83
ITGB1-208ENST00000464001 IGHV4-61A0A0C4DH41 118 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 A0A1B0GWJ7 208 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 TRIM77I1YAP6 450 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 OGG1O15527 345 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 NEMFO60524 1076 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 MTX2O75431 263 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 SCGB2A1O75556 95 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 CXCL14O95715 111 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 PAHP00439 452 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 IGHV4-59P01825 116 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 FRMD6-AS1P0C7T7 363 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 LBPP18428 481 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 HNRNPA2B1P22626 353 aaKnown RBP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 CBLP22681 906 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 ACP1P24666 158 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 PSMA5P28066 241 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 CCND2P30279 289 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 SMSP52788 366 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 CDH11P55287 796 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 HNRNPKP61978 463 aaKnown RBP eCLIP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 PTPRCAPQ14761 206 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 IQCCQ4KMZ1 466 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 KLHL26Q53HC5 615 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 LBHQ53QV2 105 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 FASTKD1Q53R41 847 aaKnown RBP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 DHRS7BQ6IAN0 325 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 FAM109BQ6ICB4 259 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 KLC3Q6P597 504 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 SLC16A9Q7RTY1 509 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 VASH2Q86V25 355 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 BATF2Q8N1L9 274 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 LRRC43Q8N309 656 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 DRAXINQ8NBI3 349 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 GANCQ8TET4 914 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 ZNRF4Q8WWF5 429 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 NSMAFQ92636 917 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 EEF2KMTQ96G04 330 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 CFAP36Q96G28 342 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 CNOT6LQ96LI5 555 aaKnown RBP3.61□□□□□ -1.83
ITGB1-208ENST00000464001 NSMCE2Q96MF7 247 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 TTC25Q96NG3 672 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 NECTIN4Q96NY8 510 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 KLHL5Q96PQ7 755 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 TBCDQ9BTW9 1192 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 RAB33BQ9H082 229 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 SPATC1LQ9H0A9 340 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 TMEM117Q9H0C3 514 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 KCNK15Q9H427 330 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 YY1AP1Q9H869 796 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 MIOSQ9NXC5 875 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 POLLQ9UGP5 575 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 SUN2Q9UH99 717 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 ASIC3Q9UHC3 531 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 DNPEPQ9ULA0 475 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 SNX7Q9UNH6 387 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 SNX6Q9UNH7 406 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 KCNK6Q9Y257 313 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 NPHP3Q7Z494 1330 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 PCNX3Q9H6A9 2034 aa3.61□□□□□ -1.83
ITGB1-208ENST00000464001 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TRIM49BA6NDI0 452 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 SDR42E2A6NKP2 422 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 F8WDY8 70 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TLR4O00206 839 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TO15178 435 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 NUDT21O43809 227 aaKnown RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 CRCPO75575 148 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TOMM70O94826 608 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 MOCS3O95396 460 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 PCCBP05166 539 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 SBK2P0C263 348 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 LINGO3P0C6S8 592 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TRIM49P0CI25 452 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TRIM49CP0CI26 452 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 SKILP12757 684 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 ACTN1P12814 892 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 GATA1P15976 413 aaPredicted RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 CYP2A7P20853 494 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 PTPN4P29074 926 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TIA1P31483 386 aaKnown RBP eCLIP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms