RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 PPM1BO75688 479 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 EGFP01133 1207 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 RHOCP08134 193 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 CCNYL3P0C7X3 344 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 PRR35P0CG20 571 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 ALAS2P22557 587 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 PSMB4P28070 264 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 TNFSF8P32971 234 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 TRIM23P36406 574 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 CLCN5P51795 746 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 HKDC1Q2TB90 917 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 CACHD1Q5VU97 1274 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 ZNF783Q6ZMS7 281 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 GDPGP1Q6ZNW5 385 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 IFNEQ86WN2 208 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 DTX3Q8N9I9 347 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 DNAJB14Q8TBM8 379 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 CSPG4P5Q96PW8 444 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 HDHD5Q9BXW7 423 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 MAGEB5Q9BZ81 275 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 SLC6A17Q9H1V8 727 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 STUB1Q9UNE7 303 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 NEU3Q9UQ49 428 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 PRELID3BQ9Y3B1 194 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 RNF215Q9Y6U7 377 aa11.06□□□□□ -0.64
TRAPPC3-205ENST00000462715 MIA3Q5JRA6 1907 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 FAM95CA0A1B0GW59 222 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TGM6O95932 706 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 PDGFBP01127 241 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 IFNA7P01567 189 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 RETP07949 1114 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 RRASP10301 218 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 GOT1P17174 413 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 DDCP20711 480 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 ZP3P21754 424 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TPMTP51580 245 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 CYP4F2P78329 520 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 FLI1Q01543 452 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 CYP4F3Q08477 520 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 LMAN2Q12907 356 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 GPR19Q15760 415 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 RABL3Q5HYI8 236 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 KANK2Q63ZY3 851 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 KCTD11Q693B1 232 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 ASTLQ6HA08 431 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 CXorf57Q6NSI4 855 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 MAMSTRQ6ZN01 415 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 GHDCQ8N2G8 530 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 C9orf62Q8N4C0 152 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 RTL3Q8N8U3 475 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 DUSP18Q8NEJ0 188 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 OR52K1Q8NGK4 314 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 WFDC5Q8TCV5 224 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 HEXDCQ8WVB3 486 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 DACT3Q96B18 629 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TSPAN17Q96FV3 270 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 IER2Q9BTL4 223 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 RACGAP1Q9H0H5 632 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 LMAN1LQ9HAT1 526 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 SMURF1Q9HCE7 757 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 IFT46Q9NQC8 304 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 MED9Q9NWA0 146 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 HSPB11Q9Y547 144 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 STON1Q9Y6Q2 735 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TSPAN4O14817 238 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 PTP4A3O75365 173 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TPOP07202 933 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 IGFBP5P24593 272 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 FMO3P31513 532 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 CD70P32970 193 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 HOXA1P49639 335 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 OR4D2P58180 307 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 MRPL28Q13084 256 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 GBX1Q14549 363 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 ARTNQ5T4W7 220 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 SPESP1Q6UW49 350 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 CES3Q6UWW8 571 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TMPRSS11AQ6ZMR5 421 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TRMT11Q7Z4G4 463 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 KIAA0907Q7Z7F0 614 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 SLC41A1Q8IVJ1 513 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 KLHDC8BQ8IXV7 354 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 DTWD1Q8N5C7 304 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 C1orf52Q8N6N3 182 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 ZNF680Q8NEM1 530 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 ACVR1CQ8NER5 493 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 OR8H1Q8NGG4 311 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 BTN2A2Q8WVV5 523 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 TUBGCP3Q96CW5 907 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 SLC47A1Q96FL8 570 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 RADILQ96JH8 1075 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 USB1Q9BQ65 265 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 CEP41Q9BYV8 373 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 CIPCQ9C0C6 399 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 RANBP3Q9H6Z4 567 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 AIG1Q9NVV5 245 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 GMPPBQ9Y5P6 360 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 V9GYH0 126 aa11.05□□□□□ -0.64
TRAPPC3-205ENST00000462715 DOCK4Q8N1I0 1966 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms