RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 DMRT3Q9NQL9 472 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 RLIMQ9NVW2 624 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 ATP6V1HQ9UI12 483 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 OR2A25A4D2G3 310 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 SOBPA7XYQ1 873 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 KLK1P06870 262 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 C1GALT1C1LP0DN25 315 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 DDX6P26196 483 aaKnown RBP eCLIP16.25■□□□□ 0.193e-35■■□□□ 11.9
ACTB-207ENST00000462494 C21orf33P30042 268 aaPredicted RBP16.25■□□□□ 0.19
ACTB-207ENST00000462494 SOAT1P35610 550 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 IDH2P48735 452 aaKnown RBP16.25■□□□□ 0.19
ACTB-207ENST00000462494 FPGSQ05932 587 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 HIST2H2ACQ16777 129 aaPredicted RBP16.25■□□□□ 0.19
ACTB-207ENST00000462494 IFI44LQ53G44 452 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 HIST2H2AA3Q6FI13 130 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 FAM180BQ6P0A1 224 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 KIAA0907Q7Z7F0 614 aaPredicted RBP16.25■□□□□ 0.19
ACTB-207ENST00000462494 RNF130Q86XS8 419 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 PLD3Q8IV08 490 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 C16orf78Q8WTQ4 265 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 LGALS12Q96DT0 336 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 VMP1Q96GC9 406 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 SPNS1Q9H2V7 528 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 DKK3Q9UBP4 350 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 PMF1-BGLAPU3KQ54 211 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 LTBP2Q14767 1821 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 J3KTA2 159 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 DPM1O60762 260 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 TNFRSF21O75509 655 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 FURINP09958 794 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 RXRGP48443 463 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 LRRC74AQ0VAA2 488 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 INAQ16352 499 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 EXOC3L2Q2M3D2 409 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 RAET1GQ6H3X3 334 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 ZNF740Q8NDX6 193 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 DYNC2LI1Q8TCX1 351 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 S100ZQ8WXG8 99 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 TAMM41Q96BW9 452 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 CXorf40BQ96DE9 158 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 DTD2Q96FN9 168 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 ALPK1Q96QP1 1244 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 EFCAB11Q9BUY7 163 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 CHCHD3Q9NX63 227 aaKnown RBP16.24■□□□□ 0.19
ACTB-207ENST00000462494 SH3GLB1Q9Y371 365 aa16.24■□□□□ 0.19
ACTB-207ENST00000462494 KPNA4O00629 521 aaPredicted RBP16.23■□□□□ 0.19
ACTB-207ENST00000462494 DGKGP49619 791 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 NUDT6P53370 316 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 PNLIPRP1P54315 467 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 ST8SIA6P61647 398 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 NIPAL1Q6NVV3 410 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 LGI4Q8N135 537 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 OR52N2Q8NGI0 321 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 OR9A1PQ8NGU1 263 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 UTP15Q8TED0 518 aaKnown RBP16.23■□□□□ 0.19
ACTB-207ENST00000462494 ERLEC1Q96DZ1 483 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 NIPSNAP1Q9BPW8 284 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 TRNAU1APQ9NX07 287 aaKnown RBP16.23■□□□□ 0.19
ACTB-207ENST00000462494 TMEM247A6NEH6 219 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 EFCAB9A8MZ26 197 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 FOXE1O00358 373 aaPredicted RBP16.23■□□□□ 0.19
ACTB-207ENST00000462494 PLK4O00444 970 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 MRPS14O60783 128 aaKnown RBP16.23■□□□□ 0.19
ACTB-207ENST00000462494 POU2F1P14859 743 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 CDH3P22223 829 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 GGT2P36268 569 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 GPR1P46091 355 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 RELAQ04206 551 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 SLC5A12Q1EHB4 618 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 MPEG1Q2M385 716 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 NLRP8Q86W28 1048 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.23■□□□□ 0.197e-13■■■■□ 19.9
ACTB-207ENST00000462494 NRSN1Q8IZ57 195 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 GOT1L1Q8NHS2 421 aaPredicted RBP16.23■□□□□ 0.19
ACTB-207ENST00000462494 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.23■□□□□ 0.191e-323■■□□□ 12.2
ACTB-207ENST00000462494 SLC5A11Q8WWX8 675 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 ZHX1-C8orf76Q96EF9 292 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 LRIG1Q96JA1 1093 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 SORBS1Q9BX66 1292 aaKnown RBP16.23■□□□□ 0.19
ACTB-207ENST00000462494 ITPAQ9BY32 194 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 PRDM8Q9NQV8 689 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 PLAGL1Q9UM63 463 aa16.23■□□□□ 0.19
ACTB-207ENST00000462494 MYO7AQ13402 2215 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 GPR37L1O60883 481 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 SOD1P00441 154 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 BMP4P12644 408 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 TGFBR2P37173 567 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 CLK1P49759 484 aaKnown RBP16.22■□□□□ 0.19
ACTB-207ENST00000462494 EPHA5P54756 1037 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 CDK6Q00534 326 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 TAP2Q03519 686 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 FCHO2Q0JRZ9 810 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 TCEAL5Q5H9L2 206 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 PRSS36Q5K4E3 855 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 TRIM40Q6P9F5 258 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 PAGE2Q7Z2X7 111 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 CCDC103Q8IW40 242 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 MMP21Q8N119 569 aa16.22■□□□□ 0.19
ACTB-207ENST00000462494 OR9Q2Q8NGE9 314 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms