RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 DYTNA2CJ06 578 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 ZNF860A6NHJ4 632 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 PRAMEF4O60810 478 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 FAM155BO75949 473 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 SEC24DO94855 1032 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-210ENST00000462125 B3GALT4O96024 378 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 SERPIND1P05546 499 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 FHP07954 510 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 SLC35E2BP0CK96 405 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 CRABP2P29373 138 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 CDC16Q13042 620 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 E2F2Q14209 437 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 NSDHLQ15738 373 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 MFSD4BQ5TF39 518 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 PRAMEF9Q5VWM5 478 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 CCDC25Q86WR0 208 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 SIRT6Q8N6T7 355 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 TTLQ8NG68 377 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 STAG3L4Q8TBR4 150 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 M1APQ8TC57 530 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 FAR1Q8WVX9 515 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 AICDAQ9GZX7 198 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 KLHL31Q9H511 634 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 MMP25Q9NPA2 562 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 DNAJC11Q9NVH1 559 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 STMN3Q9NZ72 180 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 MAP10Q9P2G4 905 aa12.44□□□□□ -0.42
C9orf3-210ENST00000462125 ZNF490Q9ULM2 529 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-210ENST00000462125 DOPEY2Q9Y3R5 2298 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 ESYT3A0FGR9 886 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 LRIT2A6NDA9 550 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 NCF1BA6NI72 391 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-210ENST00000462125 NCF1CA8MVU1 366 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-210ENST00000462125 SEMA7AO75326 666 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 CLEC3AO75596 197 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 STK16O75716 305 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 TBX6O95947 436 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-210ENST00000462125 NCF1P14598 390 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-210ENST00000462125 JAK1P23458 1154 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 CASP2P42575 452 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 RAB8AP61006 207 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 STXBP1P61764 594 aaKnown RBP12.43□□□□□ -0.42
C9orf3-210ENST00000462125 OLR1P78380 273 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 ARG2P78540 354 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 PCDH1Q08174 1060 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 DLG1Q12959 904 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 ABRAXAS2Q15018 415 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 NR6A1Q15406 480 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 EXT1Q16394 746 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 BTBD16Q32M84 506 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 BEND6Q5SZJ8 279 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-210ENST00000462125 EMBQ6PCB8 327 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 QSOX2Q6ZRP7 698 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 CCDC91Q7Z6B0 441 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 KRT78Q8N1N4 520 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 ST6GALNAC3Q8NDV1 305 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 OR1N1Q8NGS0 311 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 ESAMQ96AP7 390 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 VIPAS39Q9H9C1 493 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 NMRAL1Q9HBL8 299 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 PLA2G3Q9NZ20 509 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 TEKT2Q9UIF3 430 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 TEX15Q9BXT5 2789 aa12.43□□□□□ -0.42
C9orf3-210ENST00000462125 TRAV17A0A0B4J275 112 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 CCDC189A1A4V9 331 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 HMX2A2RU54 273 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ANKUB1A6NFN9 424 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 WIPF3A6NGB9 483 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 C4orf51C9J302 202 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 CLGNO14967 610 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 CDC123O75794 336 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 AGFG2O95081 481 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 WDPCPO95876 746 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 LTA4HP09960 611 aaKnown RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 EPORP19235 508 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 GMPRP36959 345 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 HNF4AP41235 474 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 HSPA7P48741 367 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ACTN3Q08043 901 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 SLBPQ14493 270 aaKnown RBP eCLIP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 TBCCQ15814 346 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ADPRMQ3LIE5 342 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 SFT2D3Q587I9 215 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 TOR1AIP1Q5JTV8 583 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ABHD17BQ5VST6 288 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ZNF324BQ6AW86 544 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 PAPD4Q6PIY7 484 aaKnown RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 CMC1Q7Z7K0 106 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 PRR7Q8TB68 274 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 GRHL3Q8TE85 626 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 TSLPQ969D9 159 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 GAL3ST3Q96A11 431 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 MS4A6EQ96DS6 147 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 PTCD3Q96EY7 689 aaKnown RBP12.42□□□□□ -0.42
C9orf3-210ENST00000462125 CNDP1Q96KN2 507 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 PKNOX2Q96KN3 472 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ZNF354BQ96LW1 612 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 ATOH8Q96SQ7 321 aa12.42□□□□□ -0.42
C9orf3-210ENST00000462125 LPAR4Q99677 370 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms