RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 REXO4Q9GZR2 422 aaKnown RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 PRM3Q9NNZ6 103 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 MID1IP1Q9NPA3 183 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 ACSS2Q9NR19 701 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 NKIRAS1Q9NYS0 192 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 ZNF225Q9UK10 706 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 FARSAQ9Y285 508 aaKnown RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 MRPS2Q9Y399 296 aaKnown RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 AHCTF1Q8WYP5 2266 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 FASNP49327 2511 aaKnown RBP21.31■■□□□ 1
C9orf3-209ENST00000460573 A0A088AWK7 358 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 A0A0A6YYC8 382 aaPredicted RBP21.31■■□□□ 1
C9orf3-209ENST00000460573 HMGB1P1B2RPK0 211 aaPredicted RBP21.31■■□□□ 1
C9orf3-209ENST00000460573 I3L1I5 382 aaPredicted RBP21.31■■□□□ 1
C9orf3-209ENST00000460573 EFSO43281 561 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 OR4F21O95013 312 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 CAPN1P07384 714 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 SMIM10L1P0DMW3 83 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 ZNF10P21506 573 aaPredicted RBP21.31■■□□□ 1
C9orf3-209ENST00000460573 ARFIP1P53367 373 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 ZNF33BQ06732 778 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 GALNT1Q10472 559 aaPredicted RBP21.31■■□□□ 1
C9orf3-209ENST00000460573 DSG2Q14126 1118 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 LCN10Q6JVE6 187 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 FAM198BQ6UWH4 519 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 OVCH1Q7RTY7 1134 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 SYVN1Q86TM6 617 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 OR2L5Q8NG80 312 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 AGAP11Q8TF27 550 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 MS4A6EQ96DS6 147 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 SMIM10Q96HG1 83 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 CENPKQ9BS16 269 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 MS4A8Q9BY19 250 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 SLC26A1Q9H2B4 701 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 ELOVL6Q9H5J4 265 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 PADI2Q9Y2J8 665 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 MAP4K5Q9Y4K4 846 aa21.31■■□□□ 1
C9orf3-209ENST00000460573 A0A1B0GTL3 188 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 GALR3O60755 368 aaPredicted RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 TBX6O95947 436 aaPredicted RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 KRT6AP02538 564 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 KRT6BP04259 564 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 ZNF888P0CJ79 500 aaPredicted RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 LIFP15018 202 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 IL1RNP18510 177 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 FBLP22087 321 aaKnown RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 PTX3P26022 381 aaPredicted RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 PTPN4P29074 926 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 OR1D4P47884 311 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 KRT6CP48668 564 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 NCF4Q15080 339 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 HHATQ5VTY9 493 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 MLIPQ5VWP3 458 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 ADNP2Q6IQ32 1131 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 MRPL14Q6P1L8 145 aaKnown RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 TRIM40Q6P9F5 258 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 ZNF843Q8N446 348 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 METTL27Q8N6F8 245 aaPredicted RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 OR9A4Q8NGU2 314 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 METTL6Q8TCB7 284 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 TTC9Q92623 222 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 SLC45A3Q96JT2 553 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 FAR2Q96K12 515 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 MTERF1Q99551 399 aaKnown RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 ROGDIQ9GZN7 287 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 KLHL31Q9H511 634 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 WDR54Q9H977 334 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 EML4Q9HC35 981 aaKnown RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 DMRT3Q9NQL9 472 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 SLC22A11Q9NSA0 550 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 NXT1Q9UKK6 140 aaKnown RBP21.3■■□□□ 1
C9orf3-209ENST00000460573 NAALAD2Q9Y3Q0 740 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 MAU2Q9Y6X3 613 aa21.3■■□□□ 1
C9orf3-209ENST00000460573 ATP8B1O43520 1251 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 C1QL1O75973 258 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 KLHL18O94889 574 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 RECKO95980 971 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 TGFB1P01137 390 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 HMOX2P30519 316 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 HNRNPH1P31943 449 aaKnown RBP21.29■■□□□ 1
C9orf3-209ENST00000460573 SRSF6Q13247 344 aaKnown RBP21.29■■□□□ 1
C9orf3-209ENST00000460573 DDX39BQ13838 428 aaKnown RBP21.29■■□□□ 1
C9orf3-209ENST00000460573 TTMPQ5BVD1 217 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 DEPDC1Q5TB30 811 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 KHDRBS2Q5VWX1 349 aaKnown RBP21.29■■□□□ 1
C9orf3-209ENST00000460573 ENDOVQ8N8Q3 282 aaKnown RBP21.29■■□□□ 1
C9orf3-209ENST00000460573 CDYL2Q8N8U2 506 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 ANKRD42Q8N9B4 389 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 OR6Y1Q8NGX8 325 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 PPP1R14CQ8TAE6 165 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.29■■□□□ 1
C9orf3-209ENST00000460573 ZNF446Q9NWS9 450 aa21.29■■□□□ 1
C9orf3-209ENST00000460573 ZNF282Q9UDV7 671 aaPredicted RBP21.29■■□□□ 1
C9orf3-209ENST00000460573 IGLV3-12A0A075B6K2 115 aa21.28■■□□□ 1
C9orf3-209ENST00000460573 MAGEB17A8MXT2 336 aa21.28■■□□□ 1
C9orf3-209ENST00000460573 UBFD1O14562 309 aaKnown RBP21.28■■□□□ 1
C9orf3-209ENST00000460573 FFAR3O14843 346 aa21.28■■□□□ 1
C9orf3-209ENST00000460573 GPR42O15529 346 aa21.28■■□□□ 1
C9orf3-209ENST00000460573 ERI3O43414 337 aaKnown RBP21.28■■□□□ 1
C9orf3-209ENST00000460573 ULK1O75385 1050 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms