RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 STPG1Q5TH74 334 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 GUSBP11Q6P575 273 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 NXPE4Q6UWF7 544 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 B3GNT6Q6ZMB0 384 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 ZNF565Q8N9K5 539 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 SLC5A11Q8WWX8 675 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 APOLD1Q96LR9 279 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 SLC38A3Q99624 504 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 NUSAP1Q9BXS6 441 aaKnown RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 KLHL14Q9P2G3 628 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 KLHL3Q9UH77 587 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 ADGRE2Q9UHX3 823 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 DYRK1BQ9Y463 629 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 U3KQA8 63 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 PIPSLA2A3N6 862 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 E9PBE3 544 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 STMND1H3BQB6 276 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 MANBAO00462 879 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 GIPC1O14908 333 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 B4GAT1O43505 415 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 PDYNP01213 254 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 FGF4P08620 206 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 EBLN1P0CF75 366 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 UGT2B7P16662 529 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 FASLGP48023 281 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ARFIP2P53365 341 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 PKNOX1P55347 436 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 GFERP55789 205 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 CYP4F2P78329 520 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 TUBB3Q13509 450 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 GKAP1Q5VSY0 366 aaPredicted RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 EPGNQ6UW88 154 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 IL27RAQ6UWB1 636 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ZNF704Q6ZNC4 412 aaPredicted RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 NUP54Q7Z3B4 507 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 C17orf64Q86WR6 236 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 KLHDC8AQ8IYD2 350 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 OR2L3Q8NG85 312 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 NUDT8Q8WV74 236 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 RNF31Q96EP0 1072 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 PRPF18Q99633 342 aaKnown RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 AIFM2Q9BRQ8 373 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 DPH7Q9BTV6 452 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 TMUB1Q9BVT8 246 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ACTR10Q9NZ32 417 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 OR6C2Q9NZP2 312 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 TMEM9Q9P0T7 183 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 MBD2Q9UBB5 411 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ARID1BQ8NFD5 2236 aaPredicted RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 GOLGA4Q13439 2230 aaKnown RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 PCDH15Q96QU1 1955 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 SRRM3A6NNA2 597 aaPredicted RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 RHPN2P1A8MT19 583 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 HCRTR1O43613 425 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 GDF9O60383 454 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 PEX11AO75192 247 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 UBXN7O94888 489 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ETHE1O95571 254 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 C1GALT1C1LP0DN25 315 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 UROSP10746 265 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 AMD1P17707 334 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 MAGP20916 626 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 HMOX2P30519 316 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ATXN3P54252 364 aaPredicted RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 SSTP61278 116 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 SNRPNP63162 240 aaKnown RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 CFHR1Q03591 330 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 PRDX1Q06830 199 aaKnown RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 LSM12Q3MHD2 195 aaKnown RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 PERM1Q5SV97 790 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ARHGAP11AQ6P4F7 1023 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 LCTLQ6UWM7 567 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 FAM92BQ6ZTR7 304 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 MAMDC2Q7Z304 686 aaPredicted RBP9.88□□□□□ -0.83
USP39-210ENST00000459775 L3MBTL4Q8NA19 623 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 CEP70Q8NHQ1 597 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 HMGCLL1Q8TB92 370 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 C19orf60Q96EN9 201 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 CMTM3Q96MX0 182 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 RILPQ96NA2 401 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 ADNPQ9H2P0 1102 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 AKTIPQ9H8T0 292 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 NLGN3Q9NZ94 848 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 HEY2Q9UBP5 337 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 PADI4Q9UM07 663 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 CSNK1G3Q9Y6M4 447 aa9.88□□□□□ -0.83
USP39-210ENST00000459775 OR5K3A6NET4 321 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 SAP18O00422 153 aaKnown RBP9.87□□□□□ -0.83
USP39-210ENST00000459775 CDX4O14627 284 aaPredicted RBP9.87□□□□□ -0.83
USP39-210ENST00000459775 CTSBP07858 339 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 SLC2A4P14672 509 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 JUPP14923 745 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 IL32P24001 234 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 CSNK1G2P78368 415 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 CYP4F3Q08477 520 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 SQSTM1Q13501 440 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 ZIC1Q15915 447 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 MMEL1Q495T6 779 aa9.87□□□□□ -0.83
USP39-210ENST00000459775 GALNTL6Q49A17 601 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms