RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 DOLKQ9UPQ8 538 aa8.32□□□□□ -1.08
RIF1-208ENST00000457745 KLK4Q9Y5K2 254 aa8.32□□□□□ -1.08
RIF1-208ENST00000457745 CSNK1G3Q9Y6M4 447 aa8.32□□□□□ -1.08
RIF1-208ENST00000457745 AP1M2Q9Y6Q5 423 aa8.32□□□□□ -1.08
RIF1-208ENST00000457745 FAM221BA6H8Z2 402 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ZNF860A6NHJ4 632 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 GABRR3A8MPY1 467 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 C2orf74A8MZ97 194 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 GYG2O15488 501 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 CFLARO15519 480 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 CLEC3AO75596 197 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 GSNP06396 782 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 IL3P08700 152 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ANXA4P09525 319 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 ZNF888P0CJ79 500 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 SMIM10L1P0DMW3 83 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ENGP17813 658 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 CD1CP29017 333 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 MPLP40238 635 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 PLA2G16P53816 162 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 STX1BP61266 288 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 PSME3P61289 254 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 OLR1P78380 273 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ELF3P78545 371 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 MS4A2Q01362 244 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 TCF15Q12870 199 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 NR1D2Q14995 579 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 SF3A2Q15428 464 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 HIST2H2ACQ16777 129 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 DUOXA1Q1HG43 343 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 SMU1Q2TAY7 513 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ZNF750Q32MQ0 723 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 AMZ1Q400G9 498 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 PLA2G2CQ5R387 149 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 PRAMEF17Q5VTA0 474 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 HIST2H2AA3Q6FI13 130 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 FAM71E1Q6IPT2 247 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 GALNT18Q6P9A2 607 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ABHD17CQ6PCB6 329 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 SLC23A3Q6PIS1 610 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ZC3H14Q6PJT7 736 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 ZNF574Q6ZN55 896 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 USP53Q70EK8 1073 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 OOSP2Q86WS3 158 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 HPS6Q86YV9 775 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 ULK2Q8IYT8 1036 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 DNAJC22Q8N4W6 341 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 RAB42Q8N4Z0 105 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 TMEM52Q8NDY8 209 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 OR5T3Q8NGG3 340 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 OR4C6Q8NH72 309 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 NT5CQ8TCD5 201 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 UTP15Q8TED0 518 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 SLC13A3Q8WWT9 602 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 GTF2H4Q92759 462 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 CIDECQ96AQ7 238 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 TM4SF18Q96CE8 201 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 AURKBQ96GD4 344 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 SMIM10Q96HG1 83 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 MAGEB10Q96LZ2 347 aaPredicted RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 CSF3RQ99062 836 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 SERPINI1Q99574 410 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 THTPAQ9BU02 230 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 GTPBP2Q9BX10 602 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 DPY30Q9C005 99 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 REXO4Q9GZR2 422 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 PAIP1Q9H074 479 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 UCK1Q9HA47 277 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 WDR41Q9HAD4 459 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 VAPAQ9P0L0 249 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 SLC7A8Q9UHI5 535 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 GMEB2Q9UKD1 530 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 PADI4Q9UM07 663 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 SNX7Q9UNH6 387 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 EIF3LQ9Y262 564 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 RUVBL1Q9Y265 456 aaKnown RBP8.31□□□□□ -1.08
RIF1-208ENST00000457745 UNC13CQ8NB66 2214 aa8.31□□□□□ -1.08
RIF1-208ENST00000457745 CACNA1HO95180 2353 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 RALGAPA1Q6GYQ0 2036 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 A0A1W2PP18 115 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 A0A1W2PR48 441 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 ANKDD1BA6NHY2 528 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 H3BMH7 237 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 SCAMP2O15127 329 aaKnown RBP8.3□□□□□ -1.08
RIF1-208ENST00000457745 ZW10O43264 779 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 ERI3O43414 337 aaKnown RBP8.3□□□□□ -1.08
RIF1-208ENST00000457745 DNAJA2O60884 412 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 B4GALT2O60909 372 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 RASSF9O75901 435 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 CCNDBP1O95273 360 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 FURINP09958 794 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 PRPS2P11908 318 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 GNSP15586 552 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 IL1RNP18510 177 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 SLC6A2P23975 617 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 ATP5A1P25705 553 aaKnown RBP8.3□□□□□ -1.08
RIF1-208ENST00000457745 ALDH4A1P30038 563 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 AHRP35869 848 aa8.3□□□□□ -1.08
RIF1-208ENST00000457745 PGM1P36871 562 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms