RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 C14orf119Q9NWQ9 140 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 TRPS1Q9UHF7 1281 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 RNF6Q9Y252 685 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 TPRKBQ9Y3C4 175 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 KIF26AQ9ULI4 1882 aaPredicted RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 OR2A25A4D2G3 310 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 M0QX08 132 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 SLC9A3R1O14745 358 aaPredicted RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 DSCR3O14972 297 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ETHE1O95571 254 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 DLGAP3O95886 979 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 KRT6AP02538 564 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 KRT6BP04259 564 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF24P17028 368 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF30P17039 623 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 RRM2P31350 389 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 EIF2DP41214 584 aaKnown RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 KIR3DL1P43629 444 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 BDKRB1P46663 353 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 KRT6CP48668 564 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 WNT3P56703 355 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ST8SIA6P61647 398 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ABHD18Q0P651 414 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 NPRL3Q12980 569 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 CAMK2GQ13555 558 aaPredicted RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 UAP1L1Q3KQV9 507 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 DESI1Q6ICB0 168 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 NOXRED1Q6NXP6 359 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF852Q6ZMS4 543 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 GPR156Q8NFN8 814 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF566Q969W8 418 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 OTUB2Q96DC9 234 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 NRTNQ99748 197 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 MAGIXQ9H6Y5 334 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 GULP1Q9UBP9 304 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 RAPGEFL1Q9UHV5 662 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 PRKAB1Q9Y478 270 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 PCDHGA6Q9Y5G7 932 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 PABPN1LA6NDY0 278 aaKnown RBP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 ARHGEF33A8MVX0 844 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 J3KTA2 159 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 WNT9AO14904 365 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 NUAK1O60285 661 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 MMP20O60882 483 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 CCNDBP1O95273 360 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 ADH1CP00326 375 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 COX7A2P14406 83 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 JUNDP17535 347 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 VMACQ2NL98 169 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 FAM214AQ32MH5 1076 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 LRIT3Q3SXY7 679 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 C9orf64Q5T6V5 341 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 KIAA1614Q5VZ46 1190 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 TMEM220Q6QAJ8 160 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SYT12Q8IV01 421 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 MMAAQ8IVH4 418 aaKnown RBP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 RHOXF1Q8NHV9 184 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 BTN2A2Q8WVV5 523 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 C19orf43Q9BQ61 176 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SLC32A1Q9H598 525 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 RDH14Q9HBH5 336 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 NECTIN3Q9NQS3 549 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 FBXO8Q9NRD0 319 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 PCYT1BQ9Y5K3 369 aaPredicted RBP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 NOX1Q9Y5S8 564 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 PLXNA2O75051 1894 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 KCNE1BA0A087WTH5 132 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 AIREO43918 545 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 AMD1P17707 334 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 DNAJA1P31689 397 aaKnown RBP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 RAB15P59190 212 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 TMEM115Q12893 351 aaPredicted RBP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 GAB1Q13480 694 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF234Q14588 700 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF284Q2VY69 593 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 TSEN54Q7Z6J9 526 aaKnown RBP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 GLYATL1Q969I3 302 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SAMD11Q96NU1 681 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 COPS4Q9BT78 406 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 CENPOQ9BU64 300 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 TM9SF3Q9HD45 589 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 DEC1Q9P2X7 70 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 OSGIN1Q9UJX0 560 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 HCN2Q9UL51 889 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SNX6Q9UNH7 406 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SAMD4AQ9UPU9 718 aaKnown RBP11.92□□□□□ -0.5
LINC00959-201ENST00000456581 PCDHGB1Q9Y5G3 927 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 CKAP5Q14008 2032 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 FAM227AF5H4B4 570 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 GFYI3L273 518 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 LINC01565O15544 149 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 CYP7B1O75881 506 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 SOD1P00441 154 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 STSP08842 583 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 CBSLP0DN79 551 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 CBSP35520 551 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 ARHGDIAP52565 204 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 IRF3Q14653 427 aa11.92□□□□□ -0.5
LINC00959-201ENST00000456581 BCL2A1Q16548 175 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms