RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 TPRKBQ9Y3C4 175 aa14.44□□□□□ -0.1
LDLR-202ENST00000455727 GMPPBQ9Y5P6 360 aa14.44□□□□□ -0.1
LDLR-202ENST00000455727 SAP18O00422 153 aaKnown RBP14.43□□□□□ -0.1
LDLR-202ENST00000455727 MRPS14O60783 128 aaKnown RBP14.43□□□□□ -0.1
LDLR-202ENST00000455727 GBAP04062 536 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 KLK1P06870 262 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 MYOGP15173 224 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 MC1RQ01726 317 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 MEF2AQ02078 507 aaPredicted RBP14.43□□□□□ -0.1
LDLR-202ENST00000455727 NFATC3Q12968 1075 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 GPM6BQ13491 265 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 SIM2Q14190 667 aaPredicted RBP14.43□□□□□ -0.1
LDLR-202ENST00000455727 GCNT6Q5T4J0 391 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 PIP5KL1Q5T9C9 394 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 KIAA1614Q5VZ46 1190 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 METRNLQ641Q3 311 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 UBE2Q1Q7Z7E8 422 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 LRRTM4Q86VH4 590 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.43□□□□□ -0.1
LDLR-202ENST00000455727 ZNF740Q8NDX6 193 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 OR5AR1Q8NGP9 310 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 ZNF347Q96SE7 839 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 SFXN1Q9H9B4 322 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 PELI2Q9HAT8 420 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 KIF17Q9P2E2 1029 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 SPASTQ9UBP0 616 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 RAPGEFL1Q9UHV5 662 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 PSME2Q9UL46 239 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 PCYT1BQ9Y5K3 369 aaPredicted RBP14.43□□□□□ -0.1
LDLR-202ENST00000455727 COL4A3Q01955 1670 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 SEMA3DO95025 777 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 ETFAP13804 333 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 OPRD1P41143 372 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 COX20Q5RI15 118 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 ZNF852Q6ZMS4 543 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 SLC9B2Q86UD5 537 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 HEATR4Q86WZ0 1026 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 ATG16L2Q8NAA4 619 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 OR5K2Q8NHB8 316 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 CNIH3Q8TBE1 160 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 EZH1Q92800 747 aaPredicted RBP14.43□□□□□ -0.1
LDLR-202ENST00000455727 CIDECQ96AQ7 238 aaPredicted RBP14.43□□□□□ -0.1
LDLR-202ENST00000455727 PITX2Q99697 317 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 TRPM6Q9BX84 2022 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 LAMA3Q16787 3333 aa14.43□□□□□ -0.1
LDLR-202ENST00000455727 PTGES3LE9PB15 166 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 ADAMDEC1O15204 470 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 KRT75O95678 551 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 EPHX1P07099 455 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 CXCR2P25025 360 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 STT3AP46977 705 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 CDK3Q00526 305 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 EEF1A2Q05639 463 aaKnown RBP14.42□□□□□ -0.1
LDLR-202ENST00000455727 ZNF630Q2M218 657 aaPredicted RBP14.42□□□□□ -0.1
LDLR-202ENST00000455727 B3GNT8Q7Z7M8 397 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 NATD1Q8N6N6 113 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 B4GALNT2Q8NHY0 566 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 LZICQ8WZA0 190 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 FKBP10Q96AY3 582 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 IL17FQ96PD4 163 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 PCBD2Q9H0N5 130 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 SCN3BQ9NY72 215 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 NDUFAF4Q9P032 175 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 SLC23A2Q9UGH3 650 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 NUMA1Q14980 2115 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 A0A1W2PRB8 838 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 TBX19O60806 448 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 FCARP24071 287 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 AQP1P29972 269 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 SERPINB1P30740 379 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 PRIM2P49643 509 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 SLC35A2P78381 396 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 NPRL3Q12980 569 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 SCARB2Q14108 478 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 AGERQ15109 404 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 DUSP6Q16828 381 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 CRB2Q5IJ48 1285 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 IER5LQ5T953 404 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 ANGPTL8Q6UXH0 198 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 TSEN54Q7Z6J9 526 aaKnown RBP14.42□□□□□ -0.1
LDLR-202ENST00000455727 C17orf64Q86WR6 236 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 GABARAPL3Q9BY60 117 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 PITHD1Q9GZP4 211 aaPredicted RBP14.42□□□□□ -0.1
LDLR-202ENST00000455727 RUBCNLQ9H714 662 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 WASH6PQ9NQA3 447 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 EXD2Q9NVH0 621 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 HCN2Q9UL51 889 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 PRKAB1Q9Y478 270 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 ATG2AQ2TAZ0 1938 aa14.42□□□□□ -0.1
LDLR-202ENST00000455727 CHD9Q3L8U1 2897 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 GPR89AB7ZAQ6 455 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 TMX2-CTNND1H3BSU7 103 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 IFNA14P01570 189 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 IL3P08700 152 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 GPR89BP0CG08 455 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 CYP4B1P13584 511 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 TPP2P29144 1249 aaPredicted RBP14.41□□□□□ -0.1
LDLR-202ENST00000455727 RRM2P31350 389 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 IL1RL1Q01638 556 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 EMX1Q04741 257 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms