RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 SEC16BQ96JE7 1060 aa19.98■□□□□ 0.79
HMGB3-205ENST00000455596 BARD1Q99728 777 aaKnown RBP19.98■□□□□ 0.79
HMGB3-205ENST00000455596 ALG9Q9H6U8 611 aa19.98■□□□□ 0.79
HMGB3-205ENST00000455596 PLA2G3Q9NZ20 509 aa19.98■□□□□ 0.79
HMGB3-205ENST00000455596 NUDT4Q9NZJ9 180 aa19.98■□□□□ 0.79
HMGB3-205ENST00000455596 TEKT2Q9UIF3 430 aa19.98■□□□□ 0.79
HMGB3-205ENST00000455596 ANKDD1BA6NHY2 528 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 CCNT2O60583 730 aaKnown RBP19.97■□□□□ 0.79
HMGB3-205ENST00000455596 B4GALT2O60909 372 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 AGFG2O95081 481 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 CBX6O95503 412 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 TUBB4AP04350 444 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 RNH1P13489 461 aaKnown RBP19.97■□□□□ 0.79
HMGB3-205ENST00000455596 KCNC1P48547 511 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 EIF2S3LQ2VIR3 472 aaKnown RBP19.97■□□□□ 0.79
HMGB3-205ENST00000455596 XKR6Q5GH73 641 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 RPUSD3Q6P087 351 aaKnown RBP19.97■□□□□ 0.79
HMGB3-205ENST00000455596 PAPD4Q6PIY7 484 aaKnown RBP19.97■□□□□ 0.79
HMGB3-205ENST00000455596 CCDC91Q7Z6B0 441 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 AMER2Q8N7J2 671 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 PRR7Q8TB68 274 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 TSLPQ969D9 159 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 MRRFQ96E11 262 aaKnown RBP19.97■□□□□ 0.79
HMGB3-205ENST00000455596 PTCD3Q96EY7 689 aaKnown RBP19.97■□□□□ 0.79
HMGB3-205ENST00000455596 FAR2Q96K12 515 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 LPAR4Q99677 370 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 AICDAQ9GZX7 198 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 RNF32Q9H0A6 362 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 TSPYL1Q9H0U9 437 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 ACOT9Q9Y305 439 aa19.97■□□□□ 0.79
HMGB3-205ENST00000455596 A0A087X1B8 175 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 SUPT3HB4E1H0 165 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 C4orf51C9J302 202 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 PSMD12O00232 456 aaPredicted RBP19.96■□□□□ 0.79
HMGB3-205ENST00000455596 KERAO60938 352 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 SUPT3HO75486 399 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 CLEC3AO75596 197 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 HPDP32754 393 aaPredicted RBP19.96■□□□□ 0.79
HMGB3-205ENST00000455596 TNFSF10P50591 281 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 OR4D2P58180 307 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 ZNF33BQ06732 778 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 ELOAQ14241 798 aaKnown RBP19.96■□□□□ 0.79
HMGB3-205ENST00000455596 UAP1Q16222 522 aaPredicted RBP19.96■□□□□ 0.79
HMGB3-205ENST00000455596 MROH9Q5TGP6 573 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 QSOX2Q6ZRP7 698 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 LRRC70Q7Z2Q7 622 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 RELL1Q8IUW5 271 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 M1APQ8TC57 530 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 NXNL1Q96CM4 212 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 WDR34Q96EX3 536 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 ATOH8Q96SQ7 321 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 CD244Q9BZW8 370 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 KCNK13Q9HB14 408 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 IGSF5Q9NSI5 407 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 NINJ2Q9NZG7 142 aa19.96■□□□□ 0.79
HMGB3-205ENST00000455596 DMGDHQ9UI17 866 aaKnown RBP19.96■□□□□ 0.79
HMGB3-205ENST00000455596 TRAV17A0A0B4J275 112 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 LRIT2A6NDA9 550 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 ANKUB1A6NFN9 424 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 KIF2AO00139 706 aaPredicted RBP19.95■□□□□ 0.78
HMGB3-205ENST00000455596 PRMT3O60678 531 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 PRAMEF4O60810 478 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 WDPCPO95876 746 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 CTAGE8P0CG41 777 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 HNRNPH1P31943 449 aaKnown RBP19.95■□□□□ 0.78
HMGB3-205ENST00000455596 BTN3A2P78410 334 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 LAPTM5Q13571 262 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 BMPR2Q13873 1038 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 DOC2AQ14183 400 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 PAGE2BQ5JRK9 111 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 PRAMEF9Q5VWM5 478 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 H3F3CQ6NXT2 135 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 CTAGE4Q8IX94 777 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 CA13Q8N1Q1 262 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 NOA1Q8NC60 698 aaKnown RBP19.95■□□□□ 0.78
HMGB3-205ENST00000455596 GRHL3Q8TE85 626 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 MS4A6EQ96DS6 147 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 ZNF354BQ96LW1 612 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 MAGEB10Q96LZ2 347 aaPredicted RBP19.95■□□□□ 0.78
HMGB3-205ENST00000455596 PTCHD1Q96NR3 888 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 EFCAB11Q9BUY7 163 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.95■□□□□ 0.78
HMGB3-205ENST00000455596 RHBGQ9H310 441 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 ACSS3Q9H6R3 686 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 MMP25Q9NPA2 562 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 SNX15Q9NRS6 342 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 STMN3Q9NZ72 180 aa19.95■□□□□ 0.78
HMGB3-205ENST00000455596 A0A088AWK7 358 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 A8MUI8 341 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 UBXN8O00124 270 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 ERI3O43414 337 aaKnown RBP19.94■□□□□ 0.78
HMGB3-205ENST00000455596 F10P00742 488 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 C2P06681 752 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 ZNF10P21506 573 aaPredicted RBP19.94■□□□□ 0.78
HMGB3-205ENST00000455596 BTG2P78543 158 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 IRF8Q02556 426 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 HIST2H2ACQ16777 129 aaPredicted RBP19.94■□□□□ 0.78
HMGB3-205ENST00000455596 FAM83EQ2M2I3 478 aa19.94■□□□□ 0.78
HMGB3-205ENST00000455596 GLE1Q53GS7 698 aaKnown RBP19.94■□□□□ 0.78
HMGB3-205ENST00000455596 HIST2H2AA3Q6FI13 130 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms