RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 INSIG1O15503 277 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 PDE9AO76083 593 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 RGS4P49798 205 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 CDC42P60953 191 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 PCDH1Q08174 1060 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 MTAPQ13126 283 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 TJAP1Q5JTD0 557 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 STK40Q8N2I9 435 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 FBXL6Q8N531 539 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 LKAAEAR1Q8TD35 194 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 CLN6Q9NWW5 311 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 CLEC2DQ9UHP7 191 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 TRPM7Q96QT4 1865 aa16.51■□□□□ 0.23
SCUBE2-202ENST00000450649 SH3D21A4FU49 640 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 UPK3BL1B0FP48 263 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 UPK3BL2E5RIL1 263 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 SCN2BO60939 215 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 CDRT1O95170 752 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 RPLP2P05387 115 aaKnown RBP16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 CTPS1P17812 591 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 CR2P20023 1033 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 WNT3P56703 355 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 PTCHD4Q6ZW05 846 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 OR7D4Q8NG98 312 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 GTPBP3Q969Y2 492 aaKnown RBP16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 GTPBP2Q9BX10 602 aaKnown RBP16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 EBPLQ9BY08 206 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 TPT1P8Q9HAU6 139 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 ING3Q9NXR8 418 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 STUB1Q9UNE7 303 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 TEX51A0A1B0GUA7 166 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 INPPL1O15357 1258 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 TRIM3O75382 744 aaPredicted RBP16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 STK16O75716 305 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 OPN1SWP03999 348 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 CSTF2P33240 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 THPOP40225 353 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 OR1E2P47887 323 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 MAPK12P53778 367 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 RHAGQ02094 409 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 ARHGEF7Q14155 803 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 CFAP52Q8N1V2 620 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 ELOVL6Q9H5J4 265 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 B3GNT2Q9NY97 397 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 FZD4Q9ULV1 537 aa16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 LSM2Q9Y333 95 aaKnown RBP16.5■□□□□ 0.23
SCUBE2-202ENST00000450649 F5H5T6 163 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 B4GALT3O60512 393 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 MAPK1P28482 360 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 ALDH9A1P49189 494 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 TAF10Q12962 218 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 UGT8Q16880 541 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 ZNF598Q86UK7 904 aaKnown RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 OR4M2Q8NGB6 313 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 CREB3L4Q8TEY5 395 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 UBTD2Q8WUN7 234 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 SLC25A46Q96AG3 418 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 PCDHB1Q9Y5F3 818 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 TRAV19A0A0A6YYK7 116 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 ANKRD66B4E2M5 251 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 DUSP11O75319 330 aaKnown RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 CSO75390 466 aaKnown RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 ARHGEF15O94989 841 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 CLEC2LP0C7M8 214 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 ACADMP11310 421 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 HLA-EP13747 358 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 AKR1A1P14550 325 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 EPORP19235 508 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 MAP2K3P46734 347 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 FOXD4Q12950 439 aaPredicted RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 HNRNPA0Q13151 305 aaKnown RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 SPHARQ15513 63 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 PXDC1Q5TGL8 231 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 LCN1P1Q5VSP4 162 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 TRIM69Q86WT6 500 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 SLC34A3Q8N130 599 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 TTC9BQ8N6N2 239 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 CMTM7Q96FZ5 175 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 BOCQ9BWV1 1114 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 GLTPQ9NZD2 209 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 NUP50Q9UKX7 468 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 CLCA3PQ9Y6N3 262 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 HYKKA2RU49 373 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 GCM2O75603 506 aaPredicted RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 ITGB7P26010 798 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 SELENOWP63302 87 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 ATAD1Q8NBU5 361 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 LRRC20Q8TCA0 184 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 MSLNLQ96KJ4 702 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 SPON2Q9BUD6 331 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 MCOLN1Q9GZU1 580 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 TRIM45Q9H8W5 580 aaPredicted RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 NDRG2Q9UN36 371 aaKnown RBP16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 SSR3Q9UNL2 185 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 RAI2Q9Y5P3 530 aa16.49■□□□□ 0.23
SCUBE2-202ENST00000450649 SCN10AQ9Y5Y9 1956 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms