RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MECRQ9BV79 373 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 C1QTNF3Q9BXJ4 246 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 ENAMQ9NRM1 1142 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 DNAJC11Q9NVH1 559 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 ANKMY1Q9P2S6 941 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 STK38LQ9Y2H1 464 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 KCNE2Q9Y6J6 123 aa16.19■□□□□ 0.18
PRPF40A-204ENST00000450303 UBR5O95071 2799 aaPredicted RBP16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 H7BY64 318 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 FFAR3O14843 346 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 HAT1O14929 419 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 CLGNO14967 610 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 GPR42O15529 346 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 SIX3O95343 332 aaPredicted RBP16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 RPS17P08708 135 aaKnown RBP16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 EPB42P16452 691 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 SERPINB5P36952 375 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 AGTR2P50052 363 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 NAGLUP54802 743 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 TBPL1P62380 186 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 GTF2H2Q13888 395 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 CHI3L2Q15782 390 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 PRTGQ2VWP7 1150 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 PRAMEF13Q5VWM6 474 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 GTF2H2CQ6P1K8 395 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 GALNT16Q8N428 558 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 CSNK1A1LQ8N752 337 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 CKAP2Q8WWK9 683 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 ATP6V1E2Q96A05 226 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 ESAMQ96AP7 390 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 MIB2Q96AX9 1013 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 PYCR2Q96C36 320 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 SEC16BQ96JE7 1060 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 CNDP1Q96KN2 507 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 MAGEB18Q96M61 343 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 PRAP1Q96NZ9 151 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 TMEM237Q96Q45 408 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 OR2A5Q96R48 311 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 MESP1Q9BRJ9 268 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 YIPF2Q9BWQ6 316 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 SGPP1Q9BX95 441 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 SLC26A1Q9H2B4 701 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 WDR54Q9H977 334 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 GPRC5BQ9NZH0 403 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 RUVBL1Q9Y265 456 aaKnown RBP16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 SLC22A14Q9Y267 594 aa16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 FLNBO75369 2602 aaKnown RBP16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 SETXQ7Z333 2677 aaKnown RBP16.18■□□□□ 0.18
PRPF40A-204ENST00000450303 DOCK10Q96BY6 2186 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 SOCS6O14544 535 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 NPHS1O60500 1241 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 DPM1O60762 260 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 SNUPNO95149 360 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 MLYCDO95822 493 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 SERPINE1P05121 402 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 MMP11P24347 488 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 GDF5P43026 501 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 ABATP80404 500 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 CDC16Q13042 620 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 STX3Q13277 289 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 PDK4Q16654 411 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 MUM1Q2TAK8 710 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 C18orf21Q32NC0 220 aaPredicted RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 UNC50Q53HI1 259 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 FBXO48Q5FWF7 155 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 VWA2Q5GFL6 755 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 HOMEZQ8IX15 550 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 TEX9Q8N6V9 391 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 RBMXL3Q8N7X1 1067 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 STT3BQ8TCJ2 826 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 LRRC8CQ8TDW0 803 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 RERGQ96A58 199 aaPredicted RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 ZNF317Q96PQ6 595 aaPredicted RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 SMAD5Q99717 465 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 TRMOQ9BU70 441 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 GATA5Q9BWX5 397 aaPredicted RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 MANSC1Q9H8J5 431 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 EML4Q9HC35 981 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 ATP13A2Q9NQ11 1180 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 FBXL4Q9UKA2 621 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 SH2B3Q9UQQ2 575 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 PCDHGB7Q9Y5F8 929 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 HS3ST3B1Q9Y662 390 aa16.17■□□□□ 0.18
PRPF40A-204ENST00000450303 VSTM2BA6NLU5 285 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 TMEM114B3SHH9 223 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 E2F3O00716 465 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 P2RX6O15547 441 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 IGHEP01854 428 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 GNAZP19086 355 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 BGNP21810 368 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 FBLP22087 321 aaKnown RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 HRH2P25021 359 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 CORO7P57737 925 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 SNRPNP63162 240 aaKnown RBP16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 OCA2Q04671 838 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 CLCQ05315 142 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 KLC1Q07866 573 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 MYBPC3Q14896 1274 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 RBBP7Q16576 425 aa16.16■□□□□ 0.18
PRPF40A-204ENST00000450303 PRR30Q53SZ7 412 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms