RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 KIAA1958Q8N8K9 716 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PTGR2Q8N8N7 351 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 PLPP5Q8NEB5 264 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR6M1Q8NGM8 313 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR6F1Q8NGZ6 308 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RNF141Q8WVD5 230 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KIAA1191Q96A73 305 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RAB7BQ96AH8 199 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MOCOSQ96EN8 888 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 S100A16Q96FQ6 103 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 BSCL2Q96G97 398 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 PIWIL1Q96J94 861 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 OR14A2Q96R54 314 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RAD9AQ99638 391 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MYOCQ99972 504 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 VRK1Q99986 396 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF559Q9BR84 538 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 VPS25Q9BRG1 176 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC29A3Q9BZD2 475 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SHARPINQ9H0F6 387 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PRDM12Q9H4Q4 367 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 HMX1Q9NP08 348 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 ISYNA1Q9NPH2 558 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CHST12Q9NRB3 414 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CNTN3Q9P232 1028 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KLHL9Q9P2J3 617 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 LAMP5Q9UJQ1 280 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SARDHQ9UL12 918 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF490Q9ULM2 529 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 GTF2A1LQ9UNN4 478 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PCDHGA7Q9Y5G6 932 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PCDHGA1Q9Y5H4 931 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TEX264Q9Y6I9 313 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 LOXHD1Q8IVV2 1947 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KDM3BQ7LBC6 1761 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 A0A1W2PQ09 198 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TMEM218A2RU14 115 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CCDC85CA6NKD9 419 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NPIPA7E9PJI5 369 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RFXANKO14593 260 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RNF13O43567 381 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF821O75541 412 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 PIAS1O75925 651 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 FGF18O76093 207 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR2F2O95006 317 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC34A2O95436 690 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 LATS1O95835 1130 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IFNA21P01568 189 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PRH1P02810 166 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CSF1RP07333 972 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 HEXBP07686 556 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CD63P08962 238 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 FBP1P09467 338 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NPIPA8P0DM63 369 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ADORA3P0DMS8 318 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RRASP10301 218 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GADD45AP24522 165 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CDK2P24941 298 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PCSK6P29122 969 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SREBF1P36956 1147 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RFC3P40938 356 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MARCKSL1P49006 195 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SCNN1DP51172 638 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 RENBPP51606 427 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 MECP2P51608 486 aaKnown RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 NUDT6P53370 316 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC26A5P58743 744 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GPX6P59796 221 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ACTBP60709 375 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 ACTG1P63261 375 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 INCA1Q0VD86 236 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TROAPQ12815 778 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KCNAB2Q13303 367 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CDK5R2Q13319 367 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 OR2F1Q13607 317 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 CEACAM7Q14002 265 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SIM2Q14190 667 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 LAPTM4AQ15012 233 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GOLGA7BQ2TAP0 167 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GPR33Q49SQ1 333 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DCST1Q5T197 706 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 B3GNTL1Q67FW5 361 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 GPR139Q6DWJ6 353 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SLC27A4Q6P1M0 643 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 KCNIP4Q6PIL6 250 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 C5orf46Q6UWT4 87 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DET1Q7L5Y6 550 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 SYT12Q8IV01 421 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TRIM48Q8IWZ4 208 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 NAGSQ8N159 534 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 FSTL5Q8N475 847 aaPredicted RBP2.13□□□□□ -2.07
USP53-202ENST00000450251 ZNF680Q8NEM1 530 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 BBS1Q8NFJ9 593 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 IL17RDQ8NFM7 739 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 PCDH19Q8TAB3 1148 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 STT3BQ8TCJ2 826 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 GRIN3AQ8TCU5 1115 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DYNC2LI1Q8TCX1 351 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 DPF1Q92782 380 aa2.13□□□□□ -2.07
USP53-202ENST00000450251 TANKQ92844 425 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms