RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 VLDLRP98155 873 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 CAMK1Q14012 370 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SF3A2Q15428 464 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 FAM174BQ3ZCQ3 159 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SUPT20HL1Q3ZLR7 823 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 GTDC1Q4AE62 458 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 OTUD1Q5VV17 481 aaPredicted RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 HSDL2Q6YN16 418 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 GPRIN3Q6ZVF9 776 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 TMPRSS9Q7Z410 1059 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 LDB1Q86U70 411 aaPredicted RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 CALHM3Q86XJ0 350 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 CCDC36Q8IYA8 594 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 C10orf111Q8N326 155 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 CLDN22Q8N7P3 220 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 DENND6BQ8NEG7 585 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 OR8D4Q8NGM9 314 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 FAM149B1Q96BN6 582 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SAMD11Q96NU1 681 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 CCM2Q9BSQ5 444 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 HTATIP2Q9BUP3 242 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 FSD1LQ9BXM9 530 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SLC19A3Q9BZV2 496 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 TTYH1Q9H313 450 aaPredicted RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 CRISPLD1Q9H336 500 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ZCCHC4Q9H5U6 513 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 NT5DC2Q9H857 520 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ANKRA2Q9H9E1 313 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 B3GAT2Q9NPZ5 323 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ZNF226Q9NYT6 803 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 COPZ2Q9P299 210 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PLEKHB1Q9UF11 243 aaPredicted RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 TMCC3Q9ULS5 477 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 STUB1Q9UNE7 303 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PCDHGA9Q9Y5G4 932 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 A8MXK9 166 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 LACTBL1A8MY62 500 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 ISM1B1AKI9 464 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 M0R233 179 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 CACNG3O60359 315 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 AP2A2O94973 939 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 CCNDBP1O95273 360 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 TGM6O95932 706 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 LALBAP00709 142 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 IL1AP01583 271 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 ADRA2AP08913 450 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 GABRB1P18505 474 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 CAP2P40123 477 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 PXNP49023 591 aaPredicted RBP8.3□□□□□ -1.08
LSM5-208ENST00000450169 BTG1P62324 171 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 RPL6Q02878 288 aaKnown RBP8.3□□□□□ -1.08
LSM5-208ENST00000450169 CSTF1Q05048 431 aaKnown RBP8.3□□□□□ -1.08
LSM5-208ENST00000450169 KDELC2Q7Z4H8 507 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 ZBTB8OSQ8IWT0 167 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 C7orf31Q8N865 590 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 OR5T2Q8NGG2 359 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 UTP15Q8TED0 518 aaKnown RBP8.3□□□□□ -1.08
LSM5-208ENST00000450169 NXPE2Q96DL1 559 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 MYO19Q96H55 970 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 TMEM175Q9BSA9 504 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 TMEM43Q9BTV4 400 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 ATXN3LQ9H3M9 355 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 TFB2MQ9H5Q4 396 aaKnown RBP8.3□□□□□ -1.08
LSM5-208ENST00000450169 ZNF302Q9NR11 478 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 IMPAD1Q9NX62 359 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 ACTR10Q9NZ32 417 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 SH3BP4Q9P0V3 963 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 SSR3Q9UNL2 185 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 CRYL1Q9Y2S2 319 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 CSADQ9Y600 493 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 SHROOM3Q8TF72 1996 aa8.3□□□□□ -1.08
LSM5-208ENST00000450169 M0QYT0 321 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 AKAP8O43823 692 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 MMP20O60882 483 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 KERAO60938 352 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 APOL3O95236 402 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 OR56A5P0C7T3 313 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 FDXRP22570 491 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 CSKP41240 450 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 GZMMP51124 257 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 ITGA1P56199 1179 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 ZNF628Q5EBL2 1059 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 BCL2L15Q5TBC7 163 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 FRMPD2BQ6IN97 320 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 LIMS2Q7Z4I7 341 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 DEFB132Q7Z7B7 95 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 RNF180Q86T96 592 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 VSIG10LQ86VR7 867 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 OR4D10Q8NGI6 311 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 OR2T4Q8NH00 348 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 SLC5A11Q8WWX8 675 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 USP7Q93009 1102 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 HGDQ93099 445 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 COQ10AQ96MF6 247 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 HBEGFQ99075 208 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 KCNJ15Q99712 375 aa8.29□□□□□ -1.08
LSM5-208ENST00000450169 RSPH9Q9H1X1 276 aaPredicted RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 NXF3Q9H4D5 531 aaKnown RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 FAM124BQ9H5Z6 455 aaPredicted RBP8.29□□□□□ -1.08
LSM5-208ENST00000450169 PPP1R3EQ9H7J1 279 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms