RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GCGRP47871 477 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 ITGA1P56199 1179 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 SNRPNP63162 240 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 SIM1P81133 766 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 GRM7Q14831 915 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 HES3Q5TGS1 186 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 GARNL3Q5VVW2 1013 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 OR4C11Q6IEV9 310 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 ABHD13Q7L211 337 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 DEPDC7Q96QD5 511 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 C17orf62Q9BQA9 187 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 TBCDQ9BTW9 1192 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 C1orf50Q9BV19 199 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 ZNF385DQ9H6B1 395 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 AIG1Q9NVV5 245 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 OCIAD1Q9NX40 245 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 CDV3Q9UKY7 258 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 MRPS2Q9Y399 296 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 RTCAO00442 366 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 CSO75390 466 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 SCELO95171 688 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 ALOX12P18054 663 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 MAPK1P28482 360 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 NOVA1P51513 510 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 PLA2G16P53816 162 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 CLDN6P56747 220 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 IRX1P78414 480 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 NOXRED1Q6NXP6 359 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 TLDC1Q6P9B6 456 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 CYB5D1Q6P9G0 228 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 ZNF793Q6ZN11 406 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 PAGE2Q7Z2X7 111 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 NUDT13Q86X67 352 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 TTC29Q8NA56 475 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 ZCCHC10Q8TBK6 192 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 LIN37Q96GY3 246 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 C10orf90Q96M02 699 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 QRFPRQ96P65 431 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 TEFMQ96QE5 360 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 OR6C1Q96RD1 312 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 STRADBQ9C0K7 418 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 DDX31Q9H8H2 851 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 MCM8Q9UJA3 840 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 SERTAD3Q9UJW9 196 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 EIF3LQ9Y262 564 aaKnown RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 DLGAP4Q9Y2H0 992 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 POLR3HQ9Y535 204 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 HYKKA2RU49 373 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 EFCAB7A8K855 629 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 HYAL3O43820 417 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-203ENST00000449049 PCDH7O60245 1069 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 MYO1DO94832 1006 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 TPP2P29144 1249 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-203ENST00000449049 MRPL19P49406 292 aaKnown RBP13.35□□□□□ -0.27
SHMT2-203ENST00000449049 DIO3P55073 304 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 RAB8AP61006 207 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 GSTA3Q16772 222 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 NDUFA9Q16795 377 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 YOD1Q5VVQ6 348 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-203ENST00000449049 IL23RQ5VWK5 629 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 BPHLQ86WA6 291 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-203ENST00000449049 GPR135Q8IZ08 494 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 MARK4Q96L34 752 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 CATSPER2Q96P56 530 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 CMKLR1Q99788 373 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 BRINP2Q9C0B6 783 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 ROGDIQ9GZN7 287 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 CLCA2Q9UQC9 943 aa13.35□□□□□ -0.27
SHMT2-203ENST00000449049 A0A0A6YYD5 115 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 CCDC22O60826 627 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 EEDO75530 441 aaKnown RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 KLHL18O94889 574 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 MED26O95402 600 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 PRPS2P11908 318 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 FGF5P12034 268 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 BCKDHAP12694 445 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 IDO1P14902 403 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 SDC1P18827 310 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 HIST1H1TP22492 207 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 SSR2P43308 183 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 ATP4BP51164 291 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 MC2RQ01718 297 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 FAM53BQ14153 422 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 IL11RAQ14626 422 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 HERC3Q15034 1050 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 SWT1Q5T5J6 900 aaKnown RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 ZCCHC7Q8N3Z6 543 aaKnown RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 EBPLQ9BY08 206 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 NMUR2Q9GZQ4 415 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 MYLK2Q9H1R3 596 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 FBXO8Q9NRD0 319 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 IRAK4Q9NWZ3 460 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 AKAP7Q9P0M2 348 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 RARRES3Q9UL19 164 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 GPR45Q9Y5Y3 372 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 A0A0G2JN53 185 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 B4E171 279 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms