RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CREB3L1Q96BA8 519 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 SLC6A17Q9H1V8 727 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 GPRC5BQ9NZH0 403 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 SH3BP4Q9P0V3 963 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 ACSL5Q9ULC5 683 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 hCG_1807616A0A1W2PRN6 198 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 CLIC1O00299 241 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 TREHO43280 583 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 ULK1O75385 1050 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 MPC2O95563 127 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 C1QCP02747 245 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 BCKDHAP12694 445 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 RAB3AP20336 220 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 STOMP27105 288 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 LRRC32Q14392 662 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 ZNF628Q5EBL2 1059 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 MARC1Q5VT66 337 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 PLPPR4Q7Z2D5 763 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 GPRIN1Q7Z2K8 1008 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 IFNL1Q8IU54 200 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 BBS7Q8IWZ6 715 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 RBFAQ8N0V3 343 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 C7orf34Q96L11 122 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 DPH2Q9BQC3 489 aaPredicted RBP9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 SHARPINQ9H0F6 387 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 PHF11Q9UIL8 331 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 COPS3Q9UNS2 423 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 GINS2Q9Y248 185 aa9.07□□□□□ -0.96
SYNPO2-204ENST00000448416 BTAF1O14981 1849 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 J3KR12 359 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 CBX4O00257 560 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 SUV39H1O43463 412 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 KCNK5O95279 499 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 DHFRP00374 187 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 CFDP00746 253 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 ENGP17813 658 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 POU1F1P28069 291 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 AQP1P29972 269 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 RPS14P62263 151 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 PPP3R1P63098 170 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 C1DQ13901 141 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 FAM83AQ86UY5 434 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 GPR65Q8IYL9 337 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 LGI4Q8N135 537 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 TSSK3Q96PN8 268 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 TMEM43Q9BTV4 400 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 KATNAL1Q9BW62 490 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 RBCK1Q9BYM8 510 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 TMEM168Q9H0V1 697 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 PPP1R3EQ9H7J1 279 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 EMC7Q9NPA0 242 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 B3GAT2Q9NPZ5 323 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 MPP6Q9NZW5 540 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 FAM8A1Q9UBU6 413 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 DERAQ9Y315 318 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 ADAMDEC1O15204 470 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 AKAP8O43823 692 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 NIPSNAP2O75323 286 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 RPL6Q02878 288 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 SLC10A7Q0GE19 358 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 PTGES3Q15185 160 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 FRMPD2BQ6IN97 320 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 RGL4Q8IZJ4 473 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 MS4A15Q8N5U1 240 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 C3orf58Q8NDZ4 430 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 UCN3Q969E3 161 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 SAMD11Q96NU1 681 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 IL4I1Q96RQ9 567 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 HDHD2Q9H0R4 259 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 AGO3Q9H9G7 860 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 NDUFB11Q9NX14 153 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 SDHAF2Q9NX18 166 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 PTTG3PQ9NZH4 202 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 GLS2Q9UI32 602 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 COL11A1P12107 1806 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 GTPBP1O00178 669 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 FGF10O15520 208 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 LRATO95237 230 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 CELF2O95319 508 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 HOXB1P14653 301 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 PTPN6P29350 595 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 CDH12P55289 794 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 CAV3P56539 151 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 SPIBQ01892 262 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 SCRN3Q0VDG4 424 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 PCBP1Q15365 356 aaKnown RBP eCLIP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 ZBTB6Q15916 424 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 LRFN4Q6PJG9 635 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 ZNF621Q6ZSS3 439 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 FAM92BQ6ZTR7 304 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 OR11H7Q8NGC8 314 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 CHTF18Q8WVB6 975 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 GTPBP3Q969Y2 492 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 MTFMTQ96DP5 389 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 KCTD7Q96MP8 289 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 P2RY13Q9BPV8 354 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 ABCG8Q9H221 673 aa9.06□□□□□ -0.96
SYNPO2-204ENST00000448416 CDCP1Q9H5V8 836 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms