RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PLSCR3Q9NRY6 295 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 SNTG1Q9NSN8 517 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 PEX16Q9Y5Y5 336 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 APOL3O95236 402 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 TGFB1P01137 390 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 GASTP01350 101 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 JUPP14923 745 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 TNFSF8P32971 234 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 CNR2P34972 360 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 SOX6P35712 828 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 RPS13P62277 151 aaKnown RBP13.66□□□□□ -0.22
ERCC3-203ENST00000445889 CYP4F8P98187 520 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.66□□□□□ -0.22
ERCC3-203ENST00000445889 ERICH5Q6P6B1 374 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 AQP11Q8NBQ7 271 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 GPR151Q8TDV0 419 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 COL21A1Q96P44 957 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
ERCC3-203ENST00000445889 FAM129BQ96TA1 746 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 EPYCQ99645 322 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
ERCC3-203ENST00000445889 BRD9Q9H8M2 597 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
ERCC3-203ENST00000445889 WBP11Q9Y2W2 641 aaKnown RBP13.66□□□□□ -0.22
ERCC3-203ENST00000445889 RPS19P39019 145 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 CSNK1DP48730 415 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 COL9A2Q14055 689 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 DNAJB7Q7Z6W7 309 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 C11orf74Q86VG3 221 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 RNF130Q86XS8 419 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 NPAS3Q8IXF0 933 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 CMTM8Q8IZV2 173 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 CHCHD4Q8N4Q1 142 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 CHST14Q8NCH0 376 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 C11orf65Q8NCR3 313 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 OR6F1Q8NGZ6 308 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 TRMT61AQ96FX7 289 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 TRNT1Q96Q11 434 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 GABARAPL3Q9BY60 117 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 PRRG3Q9BZD7 231 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 MOV10Q9HCE1 1003 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 DNAJC27Q9NZQ0 273 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 TBC1D14Q9P2M4 693 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 EXO1Q9UQ84 846 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 CCDC88CQ9P219 2028 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 C1orf226A1L170 272 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 ARHGEF33A8MVX0 844 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 SCAMP2O15127 329 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 IDSP22304 550 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 CA8P35219 290 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 SOAT1P35610 550 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 HTR3AP46098 478 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 SSX1Q16384 188 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 BAK1Q16611 211 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 NDUFA5Q16718 116 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 GPR33Q49SQ1 333 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 Q6ZVL8 140 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 PTCHD4Q6ZW05 846 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 OR8J2Q8NGG1 315 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 HHIPQ96QV1 700 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 SORBS1Q9BX66 1292 aaKnown RBP13.65□□□□□ -0.22
ERCC3-203ENST00000445889 OR51B5Q9H339 312 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 MTG2Q9H4K7 406 aa13.65□□□□□ -0.22
ERCC3-203ENST00000445889 H3BQ06 376 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 TPST2O60704 377 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 MRPS14O60783 128 aaKnown RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 SLC16A8O95907 504 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 HOXB6P17509 224 aaKnown RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 SERPINA4P29622 427 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 SSTR4P31391 388 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 CSNK2BP67870 215 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 DUSP7Q16829 419 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 RPS26P11Q5JNZ5 115 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 LAX1Q8IWV1 398 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 DCAF4L2Q8NA75 395 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 VPS35Q96QK1 796 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 YME1L1Q96TA2 773 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 NRTNQ99748 197 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 SLC30A2Q9BRI3 323 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 SLC35A5Q9BS91 424 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 VN1R3Q9BXE9 311 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 NXF2Q9GZY0 626 aaKnown RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 B4GALT6Q9UBX8 382 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 TBC1D24Q9ULP9 559 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 TMEM98Q9Y2Y6 226 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 PRRG1O14668 218 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 CSF2P04141 144 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 ATP1B2P14415 290 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 CYP2A7P20853 494 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 PDHA2P29803 388 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 MICAQ29983 383 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 PRSS53Q2L4Q9 553 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 FAM26DQ5JW98 314 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms