RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OR5F1O95221 314 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 VIPP01282 170 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 ALPLP05186 524 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 CTSEP14091 401 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 TCF3P15923 654 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 RYKP34925 604 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 PPP5CP53041 499 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 EXOC3L2Q2M3D2 409 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 LY6G5CQ5SRR4 150 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 GPR149Q86SP6 731 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 RACGAP1Q9H0H5 632 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 ZNF451Q9Y4E5 1061 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 IGLV3-10A0A075B6K4 115 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 AGRPO00253 132 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 MUSKO15146 869 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 TLX2O43763 284 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 UGDHO60701 494 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 RPL10P27635 214 aaKnown RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 SERPINA11Q86U17 422 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 CLECL1Q8IZS7 167 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 HS3ST5Q8IZT8 346 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 IRF7Q92985 503 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 ARHGEF33A8MVX0 844 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 CACNG3O60359 315 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 LEFTY1O75610 366 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 OR6A2O95222 327 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 RCVRNP35243 200 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 EIPR1Q53HC9 387 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 CES4AQ5XG92 561 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 PSRC1Q6PGN9 363 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 ZNF517Q6ZMY9 492 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 RBM23Q86U06 439 aaKnown RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 ZNF366Q8N895 744 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 CHDHQ8NE62 594 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 FIBINQ8TAL6 211 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 LCN9Q8WX39 176 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 ITM2BQ9Y287 266 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 ZNF831Q5JPB2 1677 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 SLITRK5O94991 958 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 SOX14O95416 240 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 LAMP1P11279 417 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 SDC1P18827 310 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 APLP1P51693 650 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 ZNF805Q5CZA5 627 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 SUSD1Q6UWL2 747 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 KLHL36Q8N4N3 616 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 MGLLQ99685 303 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 CLMPQ9H6B4 373 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 DNAJC27Q9NZQ0 273 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 GJB3O75712 270 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 NUDT14O95848 222 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 OPRL1P41146 370 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 NCS1P62166 190 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 MADCAM1Q13477 382 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 E2F2Q14209 437 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 MEDAGQ5VYS4 303 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 FOXB2Q5VYV0 432 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 GPRC5BQ9NZH0 403 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 RHCGQ9UBD6 479 aa16.03■□□□□ 0.16
TCOF1-206ENST00000445265 MAGED1Q9Y5V3 778 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-206ENST00000445265 PLOD2O00469 737 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 IFNA16P05015 189 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 AGXTP21549 392 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 TCEANCQ8N8B7 351 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 FAM110BQ8TC76 370 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 OR5P2Q8WZ92 322 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 IGFLR1Q9H665 355 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 PLAC1Q9HBJ0 212 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 INTS6Q9UL03 887 aaKnown RBP16.02■□□□□ 0.16
TCOF1-206ENST00000445265 PCDHGB5Q9Y5G0 923 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 UBE2QL1A1L167 161 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 C1QAP02745 245 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 ADH5P11766 374 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 GTF2E2P29084 291 aaKnown RBP16.02■□□□□ 0.16
TCOF1-206ENST00000445265 DGKEP52429 567 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 CXCR4P61073 352 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 FCHO2Q0JRZ9 810 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 CPZQ66K79 652 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 NADSYN1Q6IA69 706 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 ADGRG2Q8IZP9 1017 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 PAPD5Q8NDF8 572 aaKnown RBP16.02■□□□□ 0.16
TCOF1-206ENST00000445265 HUS1BQ8NHY5 278 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 ASPNQ9BXN1 380 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 ACPTQ9BZG2 426 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 UBR3Q6ZT12 1888 aa16.02■□□□□ 0.16
TCOF1-206ENST00000445265 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.02■□□□□ 0.15
TCOF1-206ENST00000445265 CAPN5O15484 640 aaPredicted RBP16.02■□□□□ 0.15
TCOF1-206ENST00000445265 STSP08842 583 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 RHCEP18577 417 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 WASP42768 502 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 KIAA1324Q6UXG2 1013 aaKnown RBP16.02■□□□□ 0.15
TCOF1-206ENST00000445265 GALNT10Q86SR1 603 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 TMEM203Q969S6 136 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 OTUB2Q96DC9 234 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 GPN2Q9H9Y4 310 aaPredicted RBP16.02■□□□□ 0.15
TCOF1-206ENST00000445265 WNT6Q9Y6F9 365 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 A0A0U1RQS6 177 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 CDRT1O95170 752 aa16.02■□□□□ 0.15
TCOF1-206ENST00000445265 NT5EP21589 574 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms