RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PTCHD3Q3KNS1 767 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 TTLL9Q3SXZ7 439 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 TRMT61AQ96FX7 289 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 PDLIM5Q96HC4 596 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 EBPLQ9BY08 206 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ACTR6Q9GZN1 396 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 DPAGT1Q9H3H5 408 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GNG14A0A1W2PPG7 69 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 RAMP2O60895 175 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 APEX1P27695 318 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 PBX3P40426 434 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 RPL35P42766 123 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 RPS25P62851 125 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 ZNF169Q14929 603 aaPredicted RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 MPP7Q5T2T1 576 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 RTL4Q6ZR62 310 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 FAM83AQ86UY5 434 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 TBC1D20Q96BZ9 403 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CUEDC1Q9NWM3 386 aaPredicted RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 A0A1B0GTL3 188 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 SOX9P48436 509 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 STC1P52823 247 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GMFBP60983 142 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CXorf57Q6NSI4 855 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 RBFAQ8N0V3 343 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ZBED6CLQ96FA7 236 aaPredicted RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 SMARCD1Q96GM5 515 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CACNG6Q9BXT2 260 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CHIAQ9BZP6 476 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ENAMQ9NRM1 1142 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ELF5Q9UKW6 265 aaPredicted RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 CBX4O00257 560 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 TLX2O43763 284 aaPredicted RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 RHCEP18577 417 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 DNASE1P24855 282 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 KCNC3Q14003 757 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 IFI44LQ53G44 452 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ZNF628Q5EBL2 1059 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CCDC71Q8IV32 467 aaPredicted RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 CHCHD4Q8N4Q1 142 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 SELENOMQ8WWX9 145 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 HERVK_113Q902F9 699 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 MAL2Q969L2 176 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GLYATL1P3A0A0U1RQE8 302 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ARHGEF33A8MVX0 844 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GNB5O14775 395 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GPC1P35052 558 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GDI2P50395 445 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 ACSM2AQ08AH3 577 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ACSM2BQ68CK6 577 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ANKS3Q6ZW76 656 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 UXS1Q8NBZ7 420 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 FAM46DQ8NEK8 389 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ZFP3Q96NJ6 502 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 SLC25A37Q9NYZ2 338 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 PTCH2Q9Y6C5 1203 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 WASH4PA8MWX3 477 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 HPGDSO60760 199 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 EPOP01588 193 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 HOXC5Q00444 222 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 PPIGQ13427 754 aaKnown RBP eCLIP4.84□□□□□ -1.64
HERC1-201ENST00000443617 GLCCI1Q86VQ1 547 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 FBXO16Q8IX29 292 aaPredicted RBP4.84□□□□□ -1.64
HERC1-201ENST00000443617 SAMD12Q8N8I0 201 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 ESAMQ96AP7 390 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 C1orf74Q96LT6 269 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 THAP7Q9BT49 309 aaPredicted RBP4.84□□□□□ -1.64
HERC1-201ENST00000443617 C1QTNF3Q9BXJ4 246 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 BEX1Q9HBH7 125 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 NMRK2Q9NPI5 230 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 BIN3Q9NQY0 253 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 KPNA3O00505 521 aaPredicted RBP4.84□□□□□ -1.64
HERC1-201ENST00000443617 OR10H3O60404 316 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 HLA-EP13747 358 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 PCBP2Q15366 365 aaKnown RBP eCLIP4.84□□□□□ -1.64
HERC1-201ENST00000443617 MSANTD1Q6ZTZ1 278 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 GHDCQ8N2G8 530 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 RTL3Q8N8U3 475 aaKnown RBP4.84□□□□□ -1.64
HERC1-201ENST00000443617 ISG20Q96AZ6 181 aaKnown RBP4.84□□□□□ -1.64
HERC1-201ENST00000443617 CMTM7Q96FZ5 175 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 SLC38A2Q96QD8 506 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 NELL2Q99435 816 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 SLC6A17Q9H1V8 727 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 TVP23BQ9NYZ1 205 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 PTBP1P26599 531 aaKnown RBP eCLIP4.84□□□□□ -1.641e-6■■■■□ 22.6
HERC1-201ENST00000443617 CRYBB2P43320 205 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 TBX4P57082 545 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 LRRC74AQ0VAA2 488 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 NTRK2Q16620 822 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 TAC4Q86UU9 113 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 FERD3LQ96RJ6 166 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 OSMRQ99650 979 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 MED18Q9BUE0 208 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 GPR63Q9BZJ6 419 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 TNFRSF10DQ9UBN6 386 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 KIF25Q9UIL4 384 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 MAP4K5Q9Y4K4 846 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 NUP188Q5SRE5 1749 aa4.84□□□□□ -1.64
HERC1-201ENST00000443617 ZNF670-ZNF695F2Z2N8 137 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms