RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MGAT1P26572 445 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 ZFP36L2P47974 494 aaKnown RBP13.41□□□□□ -0.26
HMGN1-208ENST00000443046 GPR143P51810 404 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 OLR1P78380 273 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 PWP1Q13610 501 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 DEFB134Q4QY38 66 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 NIPAL1Q6NVV3 410 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 PAOXQ6QHF9 649 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 UBE2R2Q712K3 238 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-208ENST00000443046 BIVMQ86UB2 503 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 ZZZ3Q8IYH5 903 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 CYP4X1Q8N118 509 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 ABHD11Q8NFV4 315 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 KCNJ9Q92806 393 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 GPATCH1Q9BRR8 931 aaKnown RBP13.41□□□□□ -0.26
HMGN1-208ENST00000443046 SGPP1Q9BX95 441 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 SLC6A16Q9GZN6 736 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 CLEC4MQ9H2X3 399 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-208ENST00000443046 CLK4Q9HAZ1 481 aaKnown RBP13.41□□□□□ -0.26
HMGN1-208ENST00000443046 NECTIN3Q9NQS3 549 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 ZNF223Q9UK11 482 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-208ENST00000443046 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 PLEKHA6Q9Y2H5 1048 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 EML6Q6ZMW3 1958 aa13.41□□□□□ -0.26
HMGN1-208ENST00000443046 EIF3FO00303 357 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-208ENST00000443046 ITGA10O75578 1167 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 GLSO94925 669 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-208ENST00000443046 FTCDO95954 541 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 B3GALT4O96024 378 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 TUBB4AP04350 444 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 CDH1P12830 882 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 NPPBP16860 134 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 MAOAP21397 527 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 ADH7P40394 386 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 CLCN2P51788 898 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 PPIAP62937 165 aaKnown RBP13.4□□□□□ -0.26
HMGN1-208ENST00000443046 LTBQ06643 244 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 TERF2Q15554 542 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 SLC25A35Q3KQZ1 300 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 ARMC3Q5W041 872 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 NEPROQ6NW34 567 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 LCTLQ6UWM7 567 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 B3GNT6Q6ZMB0 384 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 RGS9BPQ6ZS82 235 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 PIWIL4Q7Z3Z4 852 aaKnown RBP13.4□□□□□ -0.26
HMGN1-208ENST00000443046 CAMKMTQ7Z624 323 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 STRA8Q7Z7C7 330 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 C17orf64Q86WR6 236 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 SYCE1Q8N0S2 351 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 TMEM156Q8N614 296 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 PSD4Q8NDX1 1056 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 B3GNT7Q8NFL0 401 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 CD200R1Q8TD46 325 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 C1orf54Q8WWF1 131 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 RMND5BQ96G75 393 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-208ENST00000443046 TIMMDC1Q9NPL8 285 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 PRDM9Q9NQV7 894 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 COL6A5A8TX70 2615 aa13.4□□□□□ -0.26
HMGN1-208ENST00000443046 MPDZO75970 2070 aa13.4□□□□□ -0.27
HMGN1-208ENST00000443046 TRBV11-1A0A0K0K1C0 115 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 BCKDKO14874 412 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 NDUFS4O43181 175 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 SMIM10L1P0DMW3 83 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 GRK3P35626 688 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 SKP1P63208 163 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 SNX1Q13596 522 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 AGTRAPQ6RW13 159 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 RAD9BQ6WBX8 426 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 CDC20BQ86Y33 519 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-208ENST00000443046 OR2M7Q8NG81 312 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 OR5M9Q8NGP3 310 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 OR10Q1Q8NGQ4 319 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 NT5CQ8TCD5 201 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 CREB3L4Q8TEY5 395 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 SMIM10Q96HG1 83 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 CRIM1Q9NZV1 1036 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 KCMF1Q9P0J7 381 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 ZFATQ9P243 1243 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 ADAMTS6Q9UKP5 1117 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 EDARQ9UNE0 448 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 PDE10AQ9Y233 779 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 YARS2Q9Y2Z4 477 aaKnown RBP13.39□□□□□ -0.27
HMGN1-208ENST00000443046 CLDN16Q9Y5I7 305 aa13.39□□□□□ -0.27
HMGN1-208ENST00000443046 ARHGAP21Q5T5U3 1957 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 A0A0G2JMM0 328 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 A0A1W2PPB8 328 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 A0A1W2PRS3 328 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 TRBC2A0A5B9 178 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 FIGNL2A6NMB9 653 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 A8MUA0 341 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 KIR3DP1A8MWS1 328 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 SYT5O00445 386 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 PRKNO60260 465 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-208ENST00000443046 CEP104O60308 925 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-208ENST00000443046 ZNF888P0CJ79 500 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-208ENST00000443046 CCND1P24385 295 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 KIR2DL3P43628 341 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms