RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CDC7O00311 574 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SLC25A12O75746 678 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 WDR47O94967 919 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SERPINA6P08185 405 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 GNAZP19086 355 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 IVDP26440 423 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 GSTM2P28161 218 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 CD96P40200 585 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SMSP52788 366 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 PGGT1BP53609 377 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SRSF11Q05519 484 aaKnown RBP11.05□□□□□ -0.64
TTC28-203ENST00000442232 MAPKAPK3Q16644 382 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 PPP1R3AQ16821 1122 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 KRTCAP3Q53RY4 240 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SP5Q6BEB4 398 aaPredicted RBP11.05□□□□□ -0.64
TTC28-203ENST00000442232 SPINK14Q6IE38 97 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SLC25A25Q6KCM7 469 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 MRGPRGQ86SM5 289 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 ZC3HC1Q86WB0 502 aaKnown RBP11.05□□□□□ -0.64
TTC28-203ENST00000442232 RPS19BP1Q86WX3 136 aaKnown RBP11.05□□□□□ -0.64
TTC28-203ENST00000442232 EID3Q8N140 333 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 KRT78Q8N1N4 520 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 BBOF1Q8ND07 529 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 CDKL2Q92772 493 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 GAL3ST3Q96A11 431 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 TSPAN17Q96FV3 270 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SCMH1Q96GD3 660 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 GPR137Q96N19 417 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 PWWP2AQ96N64 755 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SIGLEC12Q96PQ1 595 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 CCDC77Q9BR77 488 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 DEFB126Q9BYW3 111 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SLC6A16Q9GZN6 736 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 SPNS1Q9H2V7 528 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 CNOT10Q9H9A5 744 aaKnown RBP11.05□□□□□ -0.64
TTC28-203ENST00000442232 GRPEL1Q9HAV7 217 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 POPDC3Q9HBV1 291 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 GPAMQ9HCL2 828 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 CHST11Q9NPF2 352 aa11.05□□□□□ -0.64
TTC28-203ENST00000442232 MRPS33Q9Y291 106 aaKnown RBP11.05□□□□□ -0.64
TTC28-203ENST00000442232 SYNDIG1LA6NDD5 238 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 CLGNO14967 610 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 B3GALT4O96024 378 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 S100BP04271 92 aaPredicted RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 SP1P08047 785 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 ABOP16442 354 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 ZNF24P17028 368 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 MAOAP21397 527 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 TNFRSF8P28908 595 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 TPP2P29144 1249 aaPredicted RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 CYB561P49447 251 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 TAS2R39P59534 338 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 CALCOCO2Q13137 446 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 RCN2Q14257 317 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 ZNF460Q14592 562 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 TSNQ15631 228 aaKnown RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 BNC2Q6ZN30 1099 aaPredicted RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 CAPN12Q6ZSI9 719 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 GALNTL5Q7Z4T8 443 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 SRRM1Q8IYB3 904 aaKnown RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 ZBED8Q8IZ13 594 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 SHISA5Q8N114 240 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 GHDCQ8N2G8 530 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 TCAIMQ8N3R3 496 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 AMER2Q8N7J2 671 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 ANKRD53Q8N9V6 530 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 ELP5Q8TE02 316 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 ADAMTS18Q8TE60 1221 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 THAP3Q8WTV1 239 aaPredicted RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 CAPS2Q9BXY5 557 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 HES7Q9BYE0 225 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 TSPAN10Q9H1Z9 355 aaPredicted RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 RHOJQ9H4E5 214 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 COPS7BQ9H9Q2 264 aaPredicted RBP11.04□□□□□ -0.64
TTC28-203ENST00000442232 PLAC1Q9HBJ0 212 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 WWOXQ9NZC7 414 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 MMACHCQ9Y4U1 282 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 PSAT1Q9Y617 370 aa11.04□□□□□ -0.64
TTC28-203ENST00000442232 TCRBV16S1A1N1A0A5B0 115 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 ASPDHA6ND91 283 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 ANKDD1BA6NHY2 528 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 NCF1BA6NI72 391 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 A8MUA0 341 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 NCF1CA8MVU1 366 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 NPIPA5E9PKD4 350 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 CLDN4O14493 209 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 ERI3O43414 337 aaKnown RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 B3GALT2O43825 422 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 NME2P1O60361 137 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 C1GALT1C1LP0DN25 315 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 NCF1P14598 390 aaPredicted RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 COX6B1P14854 86 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 NME2P22392 152 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 HTR1EP28566 365 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 ST13P50502 369 aaKnown RBP11.03□□□□□ -0.64
TTC28-203ENST00000442232 CLCN2P51788 898 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 BTN3A2P78410 334 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 POU4F1Q01851 419 aa11.03□□□□□ -0.64
TTC28-203ENST00000442232 TGM3Q08188 693 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms