RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZBTB2Q8N680 514 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PROKR1Q8TCW9 393 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CANT1Q8WVQ1 401 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ZCCHC14Q8WYQ9 949 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 GLYATL1Q969I3 302 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NRBF2Q96F24 287 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PRPF18Q99633 342 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CGREF1Q99674 301 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CDC6Q99741 560 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 GABARAPL1Q9H0R8 117 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 XKR8Q9H6D3 395 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 RMND5AQ9H871 391 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ZDHHC3Q9NYG2 299 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SCHIP1Q9P0W5 487 aaPredicted RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ZMIZ1Q9ULJ6 1067 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 WDR37Q9Y2I8 494 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TDRKHQ9Y2W6 561 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CEPT1Q9Y6K0 416 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TP53BP1Q12888 1972 aaPredicted RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NOTCH2Q04721 2471 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 A0A096LPI6 279 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TSPAN11A1L157 253 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ASPDHA6ND91 283 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 LMO7DNF2Z398 122 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CDC7O00311 574 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 OR7A17O14581 309 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ACOX3O15254 700 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 FOXD2O60548 495 aaPredicted RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 POP7O75817 140 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SIX3O95343 332 aaPredicted RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CPNE6O95741 557 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 LINC00032P0C843 101 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 AMD1P17707 334 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CDH2P19022 906 aaPredicted RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CHRM3P20309 590 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CSRP1P21291 193 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PPIBP23284 216 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 HMOX2P30519 316 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PEX19P40855 299 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TRPC1P48995 793 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 HLCSP50747 726 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ALDH3A2P51648 485 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CDH13P55290 713 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CYP4F2P78329 520 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 GABREP78334 506 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 HSPA14Q0VDF9 509 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CSTF3Q12996 717 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NR0B2Q15466 257 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 INAVAQ3KP66 663 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 VPS26BQ4G0F5 336 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 C6orf52Q5T4I8 152 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PTRHD1Q6GMV3 140 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NANOGP8Q6NSW7 305 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ZCCHC8Q6NZY4 707 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CYP20A1Q6UW02 462 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 DLEU7Q6UYE1 221 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 RBM44Q6ZP01 1051 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 Q6ZSR9 355 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SATL1Q86VE3 508 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TRIML2Q8N7C3 387 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 L3MBTL4Q8NA19 623 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 METTL6Q8TCB7 284 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 EEF1AKMT1Q8WVE0 214 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF566Q969W8 418 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PMEPA1Q969W9 287 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PPWD1Q96BP3 646 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CXorf40BQ96DE9 158 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PPP1R36Q96LQ0 422 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 RNF145Q96MT1 663 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TGM7Q96PF1 710 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 OR2M4Q96R27 311 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PCDHAC1Q9H158 963 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 PCED1AQ9H1Q7 454 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SEMA6CQ9H3T2 930 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CLMPQ9H6B4 373 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NOL11Q9H8H0 719 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 NANOGQ9H9S0 305 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SEMA4BQ9NPR2 832 aaPredicted RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 SIRT5Q9NXA8 310 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 OPTCQ9UBM4 332 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 DNAJB9Q9UBS3 223 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF225Q9UK10 706 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 BLOC1S6Q9UL45 172 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TMPRSS11EQ9UL52 423 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 G3BP2Q9UN86 482 aaKnown RBP4.57□□□□□ -1.68
EDEM3-203ENST00000439962 CORO2BQ9UQ03 480 aa4.57□□□□□ -1.68
EDEM3-203ENST00000439962 TNRC6BQ9UPQ9 1833 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TRBV5-3A0A0A0MS03 114 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 A0A1W2PQM1 296 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF839A8K0R7 811 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 PYCARD-AS1I3L0S3 204 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GAPDHSO14556 408 aaPredicted RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CLOCKO15516 846 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 PRAMEF10O60809 474 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 MT-CO3P00414 261 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ANXA5P08758 320 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 JMJD7P0C870 316 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CCL4P13236 92 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 KELP23276 732 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 DCKP27707 260 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms