RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 MAT1AQ00266 395 aaKnown RBP16.76■□□□□ 0.27
CCDC188-201ENST00000439765 RGS1Q08116 209 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 CHAF1BQ13112 559 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 ATP1A4Q13733 1029 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 FAM53BQ14153 422 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 DOC2AQ14183 400 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 SYT16Q17RD7 645 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 LIPMQ5VYY2 423 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 ADNP2Q6IQ32 1131 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 TMIGD1Q6UXZ0 262 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 PTRH1Q86Y79 214 aaKnown RBP16.76■□□□□ 0.27
CCDC188-201ENST00000439765 CAPS2Q9BXY5 557 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 SLC26A1Q9H2B4 701 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 ZNF282Q9UDV7 671 aaPredicted RBP16.76■□□□□ 0.27
CCDC188-201ENST00000439765 CDC14AQ9UNH5 594 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 STX16-NPEPL1H3BU86 382 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 SGK494L7N484 410 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 STX16O14662 325 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 TRIM13O60858 407 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 CD63P08962 238 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 CXCR2P25025 360 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 HNF4AP41235 474 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 AVPR1BP47901 424 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 IRF8Q02556 426 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 OCA2Q04671 838 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 TLE1Q04724 770 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 CHIT1Q13231 466 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 VWA2Q5GFL6 755 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 MRGPREQ86SM8 312 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 PDSS2Q86YH6 399 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 RAB43Q86YS6 212 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 KRT78Q8N1N4 520 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 TEX9Q8N6V9 391 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 STT3BQ8TCJ2 826 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 THAP4Q8WY91 577 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 CCT6BQ92526 530 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 PTCD3Q96EY7 689 aaKnown RBP16.75■□□□□ 0.27
CCDC188-201ENST00000439765 EHD1Q9H4M9 534 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 ANKHQ9HCJ1 492 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 ZNF71Q9NQZ8 489 aaPredicted RBP16.75■□□□□ 0.27
CCDC188-201ENST00000439765 HCN3Q9P1Z3 774 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 NXT1Q9UKK6 140 aaKnown RBP16.75■□□□□ 0.27
CCDC188-201ENST00000439765 ANGPTL3Q9Y5C1 460 aa16.75■□□□□ 0.27
CCDC188-201ENST00000439765 ARGFXA6NJG6 315 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 H2AFYO75367 372 aaKnown RBP16.74■□□□□ 0.27
CCDC188-201ENST00000439765 RDH16O75452 317 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 DNAJB5O75953 348 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 B3GALT4O96024 378 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 ZNF888P0CJ79 500 aaPredicted RBP16.74■□□□□ 0.27
CCDC188-201ENST00000439765 EPB42P16452 691 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 IMPDH1P20839 514 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 CASRP41180 1078 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 PWP1Q13610 501 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 LACTB2Q53H82 288 aaPredicted RBP16.74■□□□□ 0.27
CCDC188-201ENST00000439765 APLFQ8IW19 511 aaPredicted RBP16.74■□□□□ 0.27
CCDC188-201ENST00000439765 SHISA5Q8N114 240 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 NT5CQ8TCD5 201 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 DYDC1Q8WWB3 177 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 SREK1Q8WXA9 508 aaKnown RBP16.74■□□□□ 0.27
CCDC188-201ENST00000439765 MIEF2Q96C03 454 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 EPN3Q9H201 632 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 PRM3Q9NNZ6 103 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 NAALAD2Q9Y3Q0 740 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 TNPO3Q9Y5L0 923 aaKnown RBP16.74■□□□□ 0.27
CCDC188-201ENST00000439765 NAV2Q8IVL1 2488 aa16.74■□□□□ 0.27
CCDC188-201ENST00000439765 H0YIG0 161 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 KLHL18O94889 574 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 NSA2O95478 260 aaKnown RBP16.73■□□□□ 0.27
CCDC188-201ENST00000439765 ZGLP1P0C6A0 271 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 EEF1DP29692 281 aaKnown RBP16.73■□□□□ 0.27
CCDC188-201ENST00000439765 HERVK_113P63132 956 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 KLC1Q07866 573 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 ASPHQ12797 758 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 SSPNQ14714 243 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 PCBP2Q15366 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC188-201ENST00000439765 DEFB134Q4QY38 66 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 TOR1AIP1Q5JTV8 583 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 ZNF678Q5SXM1 525 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 TCTN3Q6NUS6 607 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 GOLGA7Q7Z5G4 137 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 PPP1R32Q7Z5V6 425 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 MTERF4Q7Z6M4 381 aaKnown RBP16.73■□□□□ 0.27
CCDC188-201ENST00000439765 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
CCDC188-201ENST00000439765 TRPV3Q8NET8 790 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 OR6Y1Q8NGX8 325 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 L3HYPDHQ96EM0 354 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 WDR34Q96EX3 536 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 TMEM237Q96Q45 408 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 CRB3Q9BUF7 120 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 EFCAB11Q9BUY7 163 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 C1QTNF3Q9BXJ4 246 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 ERVK-6Q9BXR3 956 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 TRIM55Q9BYV6 548 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 SLC6A16Q9GZN6 736 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 MAP4K5Q9Y4K4 846 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 SLC22A7Q9Y694 548 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 DOCK10Q96BY6 2186 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 VSTM2BA6NLU5 285 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 C4orf51C9J302 202 aa16.73■□□□□ 0.27
CCDC188-201ENST00000439765 MKRN2OSH3BPM6 223 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms