RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 CDRT1O95170 752 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 JUPP14923 745 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 GLP1RP43220 463 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 TPRG1LQ5T0D9 272 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 OR9A1PQ8NGU1 263 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 THAP6Q8TBB0 222 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 P2RY13Q9BPV8 354 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 TPSD1Q9BZJ3 242 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 NUFIP1Q9UHK0 495 aaKnown RBP13.33□□□□□ -0.28
LRCH3-206ENST00000438796 MYH11P35749 1972 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 METTL21EPA6NDL7 271 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 ACOX3O15254 700 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 C22orf39Q6P5X5 142 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 OR4K1Q8NGD4 311 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 ACOT12Q8WYK0 555 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.285e-9■□□□□ 11.3
LRCH3-206ENST00000438796 BADQ92934 168 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 WACQ9BTA9 647 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 C1orf21Q9H246 121 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 KAT8Q9H7Z6 458 aaKnown RBP13.33□□□□□ -0.28
LRCH3-206ENST00000438796 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
LRCH3-206ENST00000438796 CNTN5O94779 1100 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 JUNDP17535 347 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 SLC9A3P48764 834 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 STK19P49842 368 aaPredicted RBP13.32□□□□□ -0.28
LRCH3-206ENST00000438796 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 FAM76BQ5HYJ3 339 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 OR5J2Q8NH18 312 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 ZNF516Q92618 1163 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 PPP4R1LQ9P1A2 415 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 GMEB1Q9Y692 573 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 RBM47A0AV96 593 aaKnown RBP13.32□□□□□ -0.28
LRCH3-206ENST00000438796 ANKRD66B4E2M5 251 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 H3BUI4 141 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 RBMS1P29558 406 aaKnown RBP13.32□□□□□ -0.28
LRCH3-206ENST00000438796 PRMT2P55345 433 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TPRG1Q6ZUI0 275 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TDRPQ86YL5 185 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 FITM2Q8N6M3 262 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 APOL3O95236 402 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 RAB36O95755 333 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 HMGN1P05114 100 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 IMPDH1P20839 514 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TMEM115Q12893 351 aaPredicted RBP13.32□□□□□ -0.28
LRCH3-206ENST00000438796 PON3Q15166 354 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 OR13C3Q8NGS6 347 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 DENND1AQ8TEH3 1009 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 MND1Q9BWT6 205 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 ATG5Q9H1Y0 275 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 NUDT15Q9NV35 164 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 GABRQQ9UN88 632 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 SALL3Q9BXA9 1300 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TRAV6A0A075B6T7 132 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 CXorf49A8MYA2 514 aaPredicted RBP13.32□□□□□ -0.28
LRCH3-206ENST00000438796 C2orf74A8MZ97 194 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 GALTP07902 379 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 RBM34P42696 430 aaKnown RBP13.32□□□□□ -0.28
LRCH3-206ENST00000438796 AGTR2P50052 363 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 SMPDL3AQ92484 453 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■■■■□ 24.9
LRCH3-206ENST00000438796 SLC6A7Q99884 636 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TMEM175Q9BSA9 504 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TSSK6Q9BXA6 273 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 GABRDO14764 452 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 PRKD3O94806 890 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 OR12D1P0DN82 309 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 CDK6Q00534 326 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 ITPRIPL2Q3MIP1 535 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 PRR18Q8N4B5 295 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 SCGB3A2Q96PL1 93 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 SCML2Q9UQR0 700 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 MYH8P13535 1937 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TNFSF12O43508 249 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 LEFTY1O75610 366 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 ETV3P41162 512 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 ARHGAP1Q07960 439 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 PON2Q15165 354 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 GPR33Q49SQ1 333 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 ALG10BQ5I7T1 473 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 TICAM1Q8IUC6 712 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 OR5T1Q8NG75 326 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 KCNJ9Q92806 393 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 LRRC3Q9BY71 257 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
LRCH3-206ENST00000438796 FARS2O95363 451 aaKnown RBP13.31□□□□□ -0.28
LRCH3-206ENST00000438796 ZNF84P51523 738 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 RPS3AP61247 264 aaKnown RBP13.31□□□□□ -0.28
LRCH3-206ENST00000438796 TMEM74Q96NL1 305 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 HINT2Q9BX68 163 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 IGSF9Q9P2J2 1179 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 LBX1P52954 281 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 RBM20Q5T481 1227 aaKnown RBP13.31□□□□□ -0.28
LRCH3-206ENST00000438796 GPRC6AQ5T6X5 926 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 SLC15A3Q8IY34 581 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 LRRC20Q8TCA0 184 aa13.31□□□□□ -0.28
LRCH3-206ENST00000438796 WRAP73Q9P2S5 460 aaPredicted RBP13.31□□□□□ -0.28
LRCH3-206ENST00000438796 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms