RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 NONOQ15233 471 aaKnown RBP eCLIP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC25A53Q5H9E4 307 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 FFAR4Q5NUL3 377 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 C11orf57Q6ZUT1 292 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 SPATA21Q7Z572 469 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 NUDT13Q86X67 352 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 METTL23Q86XA0 190 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 DCLK2Q8N568 766 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 BMPERQ8N8U9 685 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 OR4C3Q8NH37 302 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 HCAR2Q8TDS4 363 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 NSMAFQ92636 917 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZBED3Q96IU2 234 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 RMDN2Q96LZ7 410 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF599Q96NL3 588 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 FNBP1Q96RU3 617 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 SNX25Q9H3E2 840 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 FN3KQ9H479 309 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 GRPEL1Q9HAV7 217 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 FGF21Q9NSA1 209 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 INTS9Q9NV88 658 aaKnown RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 TMEM181Q9P2C4 612 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 TXNDC16Q9P2K2 825 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 TRMT112Q9UI30 125 aaKnown RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 POMT1Q9Y6A1 747 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 USP24Q9UPU5 2620 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 RIF1Q5UIP0 2472 aaKnown RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 DCHS1Q96JQ0 3298 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 NAV2Q8IVL1 2488 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 XIRP2A4UGR9 3374 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 A0A1W2PPW3 197 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ANTXRLA6NF34 631 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ANXA2P2A6NMY6 339 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 C2orf81A6NN90 581 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 FAM86B1E9PN63 330 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 CXCL11O14625 94 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ARPC2O15144 300 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 EXTL3O43909 919 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF821O75541 412 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 RPS6KA5O75582 802 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 GBAP04062 536 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 FAM86B2P0C5J1 330 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 PLA2G4BP0C869 781 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 CEACAM1P13688 526 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 MYL6BP14649 208 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 IFNAR1P17181 557 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ITGA3P26006 1051 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 CDC25CP30307 473 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 TLX1P31314 330 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 CSTF2P33240 577 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 BMXP51813 675 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 RPS8P62241 208 aaKnown RBP2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 KCNJ10P78508 379 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 RASGEF1BQ0VAM2 473 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 P2RY6Q15077 328 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 CCL14Q16627 93 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 PHKG1Q16816 387 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 LACTB2Q53H82 288 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 LBHQ53QV2 105 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 LRRC73Q5JTD7 316 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 DCLRE1AQ6PJP8 1040 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 PET117Q6UWS5 81 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ENPP7Q6UWV6 458 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 PIGZQ86VD9 579 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 KLHDC1Q8N7A1 406 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF248Q8NDW4 579 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 DDHD1Q8NEL9 900 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 SPATA33Q96N06 139 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 LRRC3BQ96PB8 259 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 SPAG5Q96R06 1193 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 INTS14Q96SY0 518 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 THUMPD3Q9BV44 507 aaKnown RBP2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 EDEM3Q9BZQ6 932 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 OR2B2Q9GZK3 357 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 COA1Q9GZY4 146 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 MFSD1Q9H3U5 465 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 TLE6Q9H808 572 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 RAB9BQ9NP90 201 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 SH3GLB2Q9NR46 395 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZDHHC18Q9NUE0 388 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 SPHK1Q9NYA1 384 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 TMOD2Q9NZR1 351 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 POLKQ9UBT6 870 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 RNF215Q9Y6U7 377 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 PLXNA1Q9UIW2 1896 aa2.92□□□□□ -1.94
HMGB3P12-201ENST00000438745 IGHV4-61A0A0C4DH41 118 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 A0A1W2PRQ8 180 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 CASTOR2A6NHX0 329 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 CCL24O00175 119 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 FPGTO14772 594 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 SNX3O60493 162 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 ATP6AP2O75787 350 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZFAND5O76080 213 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 MOCS3O95396 460 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 EML2O95834 649 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 PDGFBP01127 241 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 IGHV4-59P01825 116 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 EDN1P05305 212 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 HMBSP08397 361 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms