RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 VTNP04004 478 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 DLATP10515 647 aaKnown RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 SFTPCP11686 197 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 GOT1P17174 413 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 RPL35AP18077 110 aaKnown RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 IL4RP24394 825 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 ALDH1B1P30837 517 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 TKTL1P51854 596 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 CASP9P55211 416 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 HUNKP57058 714 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 DCDC1P59894 354 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 GALK2Q01415 458 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 KLHL30Q0D2K2 578 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 ZNF74Q16587 644 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 TCEAL6Q6IPX3 200 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 ZNF770Q6IQ21 691 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 SLC27A4Q6P1M0 643 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 RFPL4BQ6ZWI9 263 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 CHMP1BQ7LBR1 199 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 COX8CQ7Z4L0 72 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 CPEB2Q7Z5Q1 589 aaKnown RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 ZER1Q7Z7L7 766 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 DCUN1D3Q8IWE4 304 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 BATF2Q8N1L9 274 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 LRTM2Q8N967 370 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 IPMKQ8NFU5 416 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 OR10G8Q8NGN5 311 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 OR4C3Q8NH37 302 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 OR1L3Q8NH93 324 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 BRSK1Q8TDC3 778 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 ZNRF4Q8WWF5 429 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 SEPT8Q92599 483 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 RFT1Q96AA3 541 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 VPS39Q96JC1 886 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 MAGED4Q96JG8 741 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 GUCD1Q96NT3 240 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 DDX50Q9BQ39 737 aaKnown RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 TEX13BQ9BXU2 312 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 DDX47Q9H0S4 455 aaKnown RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 MTIF3Q9H2K0 278 aaKnown RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 RAB9BQ9NP90 201 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 PNPLA3Q9NST1 481 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 HACD3Q9P035 362 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 POLKQ9UBT6 870 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 LAMP5Q9UJQ1 280 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 CCPG1Q9ULG6 757 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 FOXA2Q9Y261 457 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 AP1M2Q9Y6Q5 423 aa4.05□□□□□ -1.76
HMGB1P45-201ENST00000435986 IGHV4-4A0A075B6R2 117 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 CCDC162PA2VCL2 907 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 ARHGAP42A6NI28 874 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 PMS2P5A8MQ11 134 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SNURFLB1AK76 121 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SSX5O60225 188 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 PRPSAP2O60256 369 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SNX4O95219 450 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SFTPBP07988 381 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 MMP10P09238 476 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 CD59P13987 128 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 MARCKSP29966 332 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 UCP2P55851 309 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 KCNK10P57789 538 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 FKBP1BP68106 108 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 GRB14Q14449 540 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 P2RY6Q15077 328 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 ZKSCAN8Q15776 578 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SGSM1Q2NKQ1 1148 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 CCDC40Q4G0X9 1142 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 XKR3Q5GH77 459 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SLC25A53Q5H9E4 307 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 DHRS11Q6UWP2 260 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 ASPGQ86U10 573 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 LAX1Q8IWV1 398 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 HDDC3Q8N4P3 179 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 TCEANCQ8N8B7 351 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SMYD1Q8NB12 490 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 TMEM178AQ8NBL3 297 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 NEK11Q8NG66 645 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 MAPK15Q8TD08 544 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 GIMAP1Q8WWP7 306 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 CTNNBL1Q8WYA6 563 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SYAP1Q96A49 352 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 ZNF560Q96MR9 790 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 PRAM1Q96QH2 718 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 TDRD1Q9BXT4 1180 aaKnown RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SLC39A8Q9C0K1 460 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 SHARPINQ9H0F6 387 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 C1orf21Q9H246 121 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 TMEM245Q9H330 911 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 LIN28AQ9H9Z2 209 aaKnown RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 MRPL17Q9NRX2 175 aaKnown RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 DBF4Q9UBU7 674 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 TRIM10Q9UDY6 481 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 UBQLN2Q9UHD9 624 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 PCSK1NQ9UHG2 260 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 PILRBQ9UKJ0 227 aa4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 STRAPQ9Y3F4 350 aaKnown RBP4.04□□□□□ -1.76
HMGB1P45-201ENST00000435986 A0A087WUV0 522 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P45-201ENST00000435986 ANTXRLA6NF34 631 aa4.03□□□□□ -1.76
HMGB1P45-201ENST00000435986 H3BMM5 538 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms