RNA–Protein interactions for RNA: ENST00000435883.1

AC003958.1-201, humanhuman

BASIC

Gene AC003958.1, Length 421 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003958.1-201ENST00000435883 SMAD2Q15796 467 aaKnown RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 BCL2A1Q16548 175 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 XKR6Q5GH73 641 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 TRIM40Q6P9F5 258 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 BRAT1Q6PJG6 821 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 VTCN1Q7Z7D3 282 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 ZBTB46Q86UZ6 589 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 THOC6Q86W42 341 aaKnown RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 TRIM69Q86WT6 500 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 RAVER1Q8IY67 606 aaKnown RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 NATD1Q8N6N6 113 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 FBXO15Q8NCQ5 510 aaPredicted RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 OR10G2Q8NGC3 310 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 OR52N2Q8NGI0 321 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 OR4C15Q8NGM1 316 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 BCL7CQ8WUZ0 217 aaPredicted RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 SKA2Q8WVK7 121 aaPredicted RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 GEMIN6Q8WXD5 167 aaKnown RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 MRPS31Q92665 395 aaKnown RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 PROX1Q92786 737 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 CLSTN3Q9BQT9 956 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 KLHL25Q9H0H3 589 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 LMAN2LQ9H0V9 348 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 CRNNQ9UBG3 495 aaPredicted RBP12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 LYVE1Q9Y5Y7 322 aa12.87□□□□□ -0.35
AC003958.1-201ENST00000435883 A0A0U1RQS6 177 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 HTR3EA5X5Y0 456 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 WASH3PC4AMC7 463 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 FOXE1O00358 373 aaPredicted RBP12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 SGTAO43765 313 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 LCKP06239 509 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 C1SP09871 688 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 LAMP1P11279 417 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 PIPP12273 146 aaPredicted RBP12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 RRM2P31350 389 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 VIPR1P32241 457 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 HMGA2P52926 109 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 COPZ1P61923 177 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 IFITM3Q01628 133 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 NHLH1Q02575 133 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 PTSQ03393 145 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 MICAQ29983 383 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 DGKKQ5KSL6 1271 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 TMEM236Q5W0B7 351 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 UNC5DQ6UXZ4 953 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 GDPGP1Q6ZNW5 385 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 BTLAQ7Z6A9 289 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 ADGRD2Q7Z7M1 963 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 TSPAN33Q86UF1 283 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 KRT73Q86Y46 540 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 CCDC71Q8IV32 467 aaPredicted RBP12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 LYSMD2Q8IV50 215 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 SLC44A2Q8IWA5 706 aaPredicted RBP12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 STX19Q8N4C7 294 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 FLCNQ8NFG4 579 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 OR56A3Q8NH54 315 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 ELMO1Q92556 727 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 WDR34Q96EX3 536 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 TPD52L3Q96J77 140 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 EGLN2Q96KS0 407 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 FOPNLQ96NB1 174 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 P2RY13Q9BPV8 354 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 CDCA4Q9BXL8 241 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 IMPAD1Q9NX62 359 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 ERVK-11Q9UQG0 969 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 ANGPT4Q9Y264 503 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 WBP11Q9Y2W2 641 aaKnown RBP12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 TSC22D4Q9Y3Q8 395 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 TESMINQ9Y4I5 508 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 PCDHGA2Q9Y5H1 932 aa12.86□□□□□ -0.35
AC003958.1-201ENST00000435883 A0A075B6Q4 140 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 NT5C1B-RDH14C9J2C7 533 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 M0R082 166 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 ZNF821O75541 412 aaPredicted RBP12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 ANXA4P09525 319 aaPredicted RBP12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 SRCP12931 536 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 IDSP22304 550 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 ITPKAP23677 461 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 CDC42P60953 191 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 SMAD4Q13485 552 aaKnown RBP12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 DOC2AQ14183 400 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 INAVAQ3KP66 663 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 CRB2Q5IJ48 1285 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 TPRG1LQ5T0D9 272 aa12.85□□□□□ -0.35
AC003958.1-201ENST00000435883 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms