RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SHOXO15266 292 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 H6PDO95479 791 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 SPARCP09486 303 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 JUNDP17535 347 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 POLR2CP19387 275 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 VSX2P58304 361 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 PRRT2Q7Z6L0 340 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 SUSD3Q96L08 255 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 WDR55Q9H6Y2 383 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 SLC45A1Q9Y2W3 748 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 PCDHAC2Q9Y5I4 1007 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 CDH10Q9Y6N8 788 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 A8MVJ9 347 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 FSCN2O14926 492 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 VILLO15195 856 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 DFNA5O60443 496 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 DEFA5Q01523 94 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 FSTL1Q12841 308 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 KCNC3Q14003 757 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 Q6ZVU0 165 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 MKLN1Q9UL63 735 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 CFAP20Q9Y6A4 193 aaKnown RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 ABCA6Q8N139 1617 aa10.83□□□□□ -0.67
SCN4A-201ENST00000435607 KIF20BQ96Q89 1820 aa10.83□□□□□ -0.67
SCN4A-201ENST00000435607 ZC3H13Q5T200 1668 aaKnown RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 GRXCR1A8MXD5 290 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 CLIC1O00299 241 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 PGCP20142 388 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 RORAP35398 523 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 CDH11P55287 796 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 HERC3Q15034 1050 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 SLC5A9Q2M3M2 681 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 FBXO43Q4G163 708 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM201Q5SNT2 666 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 CHPT1Q8WUD6 406 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 GLYATL1Q969I3 302 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 RRNAD1Q96FB5 475 aaKnown RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 FBXL18Q96ME1 805 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TGM7Q96PF1 710 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 OR5B12Q96R08 314 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 HINT2Q9BX68 163 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TAS2R10Q9NYW0 307 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM14AQ9Y6G1 99 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 PLSCR5A0PG75 271 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 KLRG2A4D1S0 409 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 FAM170BA6NMN3 283 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 SLC22A2O15244 555 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TSPAN6O43657 245 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 OR2B3O76000 313 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 GKN3PP0CG01 181 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 AZGP1P25311 298 aaKnown RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 NMBRP28336 390 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ELF3P78545 371 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 RIPPLY1Q0D2K3 151 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 UGCGQ16739 394 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TPRG1Q6ZUI0 275 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 MFSD8Q8NHS3 518 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 NELL2Q99435 816 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 MROQ9BYG7 248 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 SLC29A3Q9BZD2 475 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ACTR6Q9GZN1 396 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 SDHAF2Q9NX18 166 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 SRRM3A6NNA2 597 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 EFNA1P20827 205 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TUBG1P23258 451 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 APLNRP35414 380 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 CREG2Q8IUH2 290 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 RASGEF1CQ8N431 466 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 MAFIPQ8WZ33 124 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 AMDHD1Q96NU7 426 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 GPR174Q9BXC1 333 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 SEC14L4Q9UDX3 406 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 EPHA6Q9UF33 1036 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 PMF1-BGLAPU3KQ54 211 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 UNCXA6NJT0 531 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TGFBR3Q03167 851 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 GID4Q8IVV7 300 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 NETO2Q8NC67 525 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 LRRC3Q9BY71 257 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 EBF3Q9H4W6 596 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ACP6Q9NPH0 428 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 KCNK6Q9Y257 313 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 WNT6Q9Y6F9 365 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 CAPN8A6NHC0 703 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 MT-ND2P03891 347 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 GPR143P51810 404 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ARHGAP8P85298 464 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 RBM39Q14498 530 aaKnown RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 NRROSQ86YC3 692 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 LENG8Q96PV6 779 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF701Q9NV72 531 aaPredicted RBP10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ANKRD33BA6NCL7 494 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ITGB5P18084 799 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 MAGP20916 626 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 KCTD9Q7L273 389 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 SLC16A9Q7RTY1 509 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 PROKR1Q8TCW9 393 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms