RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ALPIP09923 528 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 ITPKAP23677 461 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SDC2P34741 201 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.11□□□□□ -0.632e-7■■■□□ 18.6
HMGCS1-202ENST00000433297 MAB21L1Q13394 359 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 MICAQ29983 383 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 DALRD3Q5D0E6 543 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 DDI2Q5TDH0 399 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 MLIPQ5VWP3 458 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 C16orf62Q7Z3J2 963 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SERPINA9Q86WD7 417 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 TCTE3Q8IZS6 198 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 Q8N402 240 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SLC43A3Q8NBI5 491 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SLC39A13Q96H72 371 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 MTERF1Q99551 399 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 ASB8Q9H765 288 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 MARCH2Q9P0N8 246 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 PIM2Q9P1W9 311 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 FAM8A1Q9UBU6 413 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 TMCC3Q9ULS5 477 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 MAPRE3Q9UPY8 281 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SCG5P05408 212 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 GPX2P18283 190 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 GABRB1P18505 474 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 CPN2P22792 545 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 NUDT1P36639 197 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 CRYBA2P53672 197 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 AP2S1P53680 142 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 SEMG2Q02383 582 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 UPP1Q16831 310 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 CCDC149Q6ZUS6 474 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 USP30Q70CQ3 517 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 CREB3L2Q70SY1 520 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 MON1AQ86VX9 555 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF683Q8IZ20 524 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 REPS1Q96D71 796 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 QRFPRQ96P65 431 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 CDCA4Q9BXL8 241 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 OARD1Q9Y530 152 aa11.11□□□□□ -0.63
HMGCS1-202ENST00000433297 TNFRSF10BO14763 440 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 MYL12BO14950 172 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 YY2O15391 372 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF7P17097 686 aaPredicted RBP11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 MYL12AP19105 171 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 TNNI3P19429 210 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 DGKAP23743 735 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 CRYBB2P43320 205 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 RPIAP49247 311 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 CLCN4P51793 760 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 LAMTOR1Q6IAA8 161 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 SYT14Q8NB59 555 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 OR6K2Q8NGY2 324 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 USP7Q93009 1102 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 WACQ9BTA9 647 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 SEC14L4Q9UDX3 406 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 TRPS1Q9UHF7 1281 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 KLHL21Q9UJP4 597 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF222Q9UK12 451 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 STUB1Q9UNE7 303 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ISM1B1AKI9 464 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ZNF670-ZNF695F2Z2N8 137 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 UGT8Q16880 541 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 GLYR1Q49A26 553 aaPredicted RBP11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 PLEKHM3Q6ZWE6 761 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 TSEN54Q7Z6J9 526 aaKnown RBP11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 C7orf57Q8NEG2 295 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 OR6C4Q8NGE1 309 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 CREB3L4Q8TEY5 395 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 C17orf62Q9BQA9 187 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 DIABLOQ9NR28 239 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 FNIP2Q9P278 1114 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ST3GAL5Q9UNP4 418 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 LZTS3O60299 673 aaPredicted RBP11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 PRAMEF1O95521 474 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 GASTP01350 101 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ANXA5P08758 320 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 PRKAR1AP10644 381 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ETFAP13804 333 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 CHMP24386 653 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 HLA-DMAP28067 261 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 MAPK1P28482 360 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 RPS24P62847 133 aaKnown RBP11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 SELENOWP63302 87 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 P2RY14Q15391 338 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 DUSP28Q4G0W2 176 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 MZT2BQ6NZ67 158 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 CARNMT1Q8N4J0 409 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 GDPD1Q8N9F7 314 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 DACT3Q96B18 629 aaPredicted RBP11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 NTMT1Q9BV86 223 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 SPATA9Q9BWV2 254 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ADGRE3Q9BY15 652 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 ATG10Q9H0Y0 220 aa11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 SPIN1Q9Y657 262 aaPredicted RBP11.1□□□□□ -0.63
HMGCS1-202ENST00000433297 A0A0G2JLL6 359 aaPredicted RBP11.09□□□□□ -0.63
HMGCS1-202ENST00000433297 SHOXO15266 292 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms