RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 GRSF1Q12849 480 aaKnown RBP eCLIP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 ELOAQ14241 798 aaKnown RBP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 RBBP5Q15291 538 aaKnown RBP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 SKIV2LQ15477 1246 aaKnown RBP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 TEAD4Q15561 434 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 ITPRIPL2Q3MIP1 535 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 TMEM259Q4ZIN3 620 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 DEPDC1Q5TB30 811 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 FAHD1Q6P587 224 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 C17orf64Q86WR6 236 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 ADGRF3Q8IZF5 1079 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 PIK3C3Q8NEB9 887 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 OR13F1Q8NGS4 319 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF420Q8TAQ5 688 aaPredicted RBP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 MAL2Q969L2 176 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 SLC35A5Q9BS91 424 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 C1QTNF2Q9BXJ5 285 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 PITHD1Q9GZP4 211 aaPredicted RBP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 C1GALT1Q9NS00 363 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
HOXC4-202ENST00000430889 TAAR2Q9P1P5 351 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 TAC3Q9UHF0 121 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 PADI2Q9Y2J8 665 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 CDH23Q9H251 3354 aa13.35□□□□□ -0.27
HOXC4-202ENST00000430889 K7EQS6 105 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 ABCB7O75027 752 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 IL3P08700 152 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 ETFAP13804 333 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 IGFBP5P24593 272 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 SERPINB1P30740 379 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 BSGP35613 385 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 WASP42768 502 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 RPS6KA3P51812 740 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 RBBP4Q09028 425 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 FADDQ13158 208 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 MLF2Q15773 248 aaPredicted RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 MEP1AQ16819 746 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 GTF2IRD2BQ6EKJ0 949 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 KIAA1161Q6NSJ0 714 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 PARM1Q6UWI2 310 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 GTF2IRD2Q86UP8 949 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 CLVS1Q8IUQ0 354 aaPredicted RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 YAF2Q8IY57 180 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 MMP21Q8N119 569 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 HDDC3Q8N4P3 179 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 LINC01555Q8NAE3 123 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 SMPDL3AQ92484 453 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 SGCDQ92629 289 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 FGF14Q92915 247 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF764Q96H86 408 aaPredicted RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 TIMM29Q9BSF4 260 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 SORBS1Q9BX66 1292 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 PCBD2Q9H0N5 130 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 ING2Q9H160 280 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 WDR26Q9H7D7 661 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 CXorf21Q9HAI6 301 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 LHX9Q9NQ69 397 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 TAS2R9Q9NYW1 312 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 EBF1Q9UH73 591 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 ACSL5Q9ULC5 683 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 CDC14AQ9UNH5 594 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 FAF1Q9UNN5 650 aaPredicted RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 WDR37Q9Y2I8 494 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 WBP11Q9Y2W2 641 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 TDRKHQ9Y2W6 561 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 CFAP20Q9Y6A4 193 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 A0A1W2PP55 124 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 JRKO75564 520 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 SEC14L2O76054 403 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 DIRAS1O95057 198 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 PCDH8O95206 1070 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 NTRK1P04629 796 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 PSMB5P28074 263 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 GSTM2P28161 218 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 TNFRSF4P43489 277 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 CLK3P49761 638 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 PCBP3P57721 371 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 HYAL1Q12794 435 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 TOP3AQ13472 1001 aaPredicted RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 KEAP1Q14145 624 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 GCNT6Q5T4J0 391 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 BROXQ5VW32 411 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 KHDRBS2Q5VWX1 349 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 DUS1LQ6P1R4 473 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 DHRS4L2Q6PKH6 230 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 FAM124AQ86V42 546 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF513Q8N8E2 541 aaPredicted RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 C12orf43Q96C57 262 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 EPYCQ99645 322 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 AIF1LQ9BQI0 150 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 DOHHQ9BU89 302 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 RPP25Q9BUL9 199 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 SLC6A16Q9GZN6 736 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 NKX2-4Q9H2Z4 354 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 TRIT1Q9H3H1 467 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 IGFLR1Q9H665 355 aa13.34□□□□□ -0.27
HOXC4-202ENST00000430889 LIN28AQ9H9Z2 209 aaKnown RBP13.34□□□□□ -0.27
HOXC4-202ENST00000430889 OR1A2Q9Y585 309 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms