RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 CENPLQ8N0S6 344 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-204ENST00000430682 CA13Q8N1Q1 262 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 TMEM52Q8NDY8 209 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 OR1N1Q8NGS0 311 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 GRHL3Q8TE85 626 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 KCTD4Q8WVF5 259 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 METTL21AQ8WXB1 218 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 EXT2Q93063 718 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 KIAA1191Q96A73 305 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 NXNL1Q96CM4 212 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 TSPAN17Q96FV3 270 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 VPS50Q96JG6 964 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 ATOH8Q96SQ7 321 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 EPS8L2Q9H6S3 715 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 ALG9Q9H6U8 611 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 COPG2Q9UBF2 871 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 CLDN16Q9Y5I7 305 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 DCHS2Q6V1P9 2916 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 MAGEB17A8MXT2 336 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 UBXN8O00124 270 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 PCDH17O14917 1159 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 WFS1O76024 890 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 SERPINA6P08185 405 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 MTHFD2P13995 350 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 GNAZP19086 355 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 TFEBP19484 476 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 HNRNPFP52597 415 aaKnown RBP11.76□□□□□ -0.53
SMPD4-204ENST00000430682 ATP6V0D1P61421 351 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 DOC2AQ14183 400 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 SLMAPQ14BN4 828 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 ABRAXAS2Q15018 415 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 TLR1Q15399 786 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 NSDHLQ15738 373 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 BTBD16Q32M84 506 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 PLAG1Q6DJT9 500 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 H3F3CQ6NXT2 135 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 PAPD4Q6PIY7 484 aaKnown RBP11.76□□□□□ -0.53
SMPD4-204ENST00000430682 TMIGD1Q6UXZ0 262 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 KIF2BQ8N4N8 673 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 MMGT1Q8N4V1 131 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 PDPRQ8NCN5 879 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 TRPV3Q8NET8 790 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 HAS2Q92819 552 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 TBC1D20Q96BZ9 403 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 MS4A6EQ96DS6 147 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 OR1F2PQ96R84 312 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 RHBGQ9H310 441 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 NECTIN3Q9NQS3 549 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 DNAJC11Q9NVH1 559 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 WWOXQ9NZC7 414 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 CD274Q9NZQ7 290 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 TXNDC16Q9P2K2 825 aa11.76□□□□□ -0.53
SMPD4-204ENST00000430682 ERRFI1Q9UJM3 462 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-204ENST00000430682 IGKV3D-11A0A0A0MRZ8 115 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 LRIT2A6NDA9 550 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 ANKUB1A6NFN9 424 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 LRRC14BA6NHZ5 514 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 A8MUI8 341 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 STK16O75716 305 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 C2P06681 752 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 CYC1P08574 325 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 MAOAP21397 527 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 STX2P32856 288 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 BTN3A2P78410 334 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 ARG2P78540 354 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 CKAP4Q07065 602 aaKnown RBP11.75□□□□□ -0.53
SMPD4-204ENST00000430682 FHL5Q5TD97 284 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 MROH9Q5TGP6 573 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF324BQ6AW86 544 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-204ENST00000430682 SULT1C3Q6IMI6 304 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 ABHD13Q7L211 337 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 UBE3DQ7Z6J8 389 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 CRLF3Q8IUI8 442 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 RNF175Q8N4F7 328 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 NFAM1Q8NET5 270 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-204ENST00000430682 FAR1Q8WVX9 515 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF592Q92610 1267 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 WDR34Q96EX3 536 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 MAGEB10Q96LZ2 347 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-204ENST00000430682 PTCHD1Q96NR3 888 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 GPR78Q96P69 363 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 NT5DC2Q9H857 520 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 RNF112Q9ULX5 631 aa11.75□□□□□ -0.53
SMPD4-204ENST00000430682 NOTCH2Q04721 2471 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 A8MUA0 341 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 ERI3O43414 337 aaKnown RBP11.74□□□□□ -0.53
SMPD4-204ENST00000430682 AGFG2O95081 481 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 ALDOAP04075 364 aaKnown RBP11.74□□□□□ -0.53
SMPD4-204ENST00000430682 PPP2R1BP30154 601 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 TDGF1P3P51864 188 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 OR4D2P58180 307 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 SLC26A5P58743 744 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 PMP22Q01453 160 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF33BQ06732 778 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 CHIT1Q13231 466 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 E2F2Q14209 437 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 WHAMMP3Q1A5X7 153 aa11.74□□□□□ -0.53
SMPD4-204ENST00000430682 ADPRMQ3LIE5 342 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms