RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 ZNF33BQ06732 778 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 CUL3Q13618 768 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 NKAIN1Q4KMZ8 207 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 DEFB134Q4QY38 66 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 SH2D4BQ5SQS7 431 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 ARHGAP40Q5TG30 622 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 CLEC6AQ6EIG7 209 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 NIPAL1Q6NVV3 410 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 ABHD17CQ6PCB6 329 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 SCIMPQ6UWF3 145 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 DTWD1Q8N5C7 304 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 IL22RA1Q8N6P7 574 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 OR9A4Q8NGU2 314 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 SNIP1Q8TAD8 396 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 AGR3Q8TD06 166 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 LRRC8CQ8TDW0 803 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 NKD1Q969G9 470 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 RGMAQ96B86 450 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 MMABQ96EY8 250 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 FAR2Q96K12 515 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 HBEGFQ99075 208 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 C17orf62Q9BQA9 187 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 ILKAPQ9H0C8 392 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 AKIRIN1Q9H9L7 192 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 BRF2Q9HAW0 419 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 ZNF304Q9HCX3 659 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 NMRK1Q9NWW6 199 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 ZDHHC2Q9UIJ5 367 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 RAP2CQ9Y3L5 183 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 MAU2Q9Y6X3 613 aa12.21□□□□□ -0.45
CCHCR1-205ENST00000428174 A0A088AWK7 358 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 A0A0G2JN53 185 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 C9J4A7 227 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 H0YIG0 161 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 SGK494L7N484 410 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 SAP18O00422 153 aaKnown RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 KLF11O14901 512 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 GALR3O60755 368 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 ETHE1O95571 254 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 ONECUT2O95948 504 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 B3GALT4O96024 378 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 ZNF10P21506 573 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 FBLP22087 321 aaKnown RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 BTN3A2P78410 334 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 SLC9A5Q14940 896 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 TGIF1Q15583 401 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 MLIPQ5VWP3 458 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 KANK2Q63ZY3 851 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 LCN10Q6JVE6 187 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 FAM199XQ6PEV8 388 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 PRSS41Q7RTY9 318 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 KIRREL3Q8IZU9 778 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 GBP7Q8N8V2 638 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 CT55Q8WUE5 264 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 KCNE4Q8WWG9 221 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 NAF1Q96HR8 494 aaKnown RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 KCNC2Q96PR1 638 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 SORT1Q99523 831 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 TBCDQ9BTW9 1192 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 ROGDIQ9GZN7 287 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 C20orf27Q9GZN8 174 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 COPS7BQ9H9Q2 264 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 SLC22A11Q9NSA0 550 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 THAP1Q9NVV9 213 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 IFT80Q9P2H3 777 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 GPN3Q9UHW5 284 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 SLC12A4Q9UP95 1085 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 NAALAD2Q9Y3Q0 740 aa12.2□□□□□ -0.46
CCHCR1-205ENST00000428174 LOC101059948A0A1B0GTJ6 334 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 SERTM1A2A2V5 107 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 ZNF860A6NHJ4 632 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 TMEM233B4DJY2 109 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 C4orf51C9J302 202 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 RTCAO00442 366 aaKnown RBP12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 SNNO75324 88 aaPredicted RBP12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 RDH16O75452 317 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 SEMA3DO95025 777 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 CAPNS1P04632 268 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 TCN2P20062 427 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 ITGAXP20702 1163 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 STAT5AP42229 794 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 ARFIP1P53367 373 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 MTTPP55157 894 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 MAT1AQ00266 395 aaKnown RBP12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 CLN3Q13286 438 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 DNASE1L3Q13609 305 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 DSG2Q14126 1118 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 IMPG1Q17R60 797 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 AP5B1Q2VPB7 878 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 OR4C11Q6IEV9 310 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 ZNF517Q6ZMY9 492 aaPredicted RBP12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 COX15Q7KZN9 410 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 OVCH1Q7RTY7 1134 aa12.19□□□□□ -0.46
CCHCR1-205ENST00000428174 UBE3DQ7Z6J8 389 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms