RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 RGS5O15539 181 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 GCM2O75603 506 aaPredicted RBP13.79□□□□□ -0.2
MSH5-206ENST00000423982 SEMA3DO95025 777 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 GPX2P18283 190 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 SLC15A1P46059 708 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 LIMK1P53667 647 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 MRPS15P82914 257 aaKnown RBP13.79□□□□□ -0.2
MSH5-206ENST00000423982 SYT12Q8IV01 421 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 KBTBD8Q8NFY9 601 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 MRPS31Q92665 395 aaKnown RBP13.79□□□□□ -0.2
MSH5-206ENST00000423982 CEP295NLQ96MC4 621 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 BEX2Q9BXY8 128 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 ATG10Q9H0Y0 220 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 LHX3Q9UBR4 397 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 CCL26Q9Y258 94 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 SLC22A14Q9Y267 594 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 LYVE1Q9Y5Y7 322 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 NINQ8N4C6 2090 aa13.79□□□□□ -0.2
MSH5-206ENST00000423982 RHOP08100 348 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 PRPS2P11908 318 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 COX7A2P14406 83 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 AMD1P17707 334 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 CDH12P55289 794 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 CAMK2BQ13554 666 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 TEAD2Q15562 447 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 TAB1Q15750 504 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 C10orf62Q5T681 223 aaPredicted RBP13.78□□□□□ -0.2
MSH5-206ENST00000423982 CXorf57Q6NSI4 855 aaKnown RBP13.78□□□□□ -0.2
MSH5-206ENST00000423982 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 B3GNT7Q8NFL0 401 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
MSH5-206ENST00000423982 OR2A14Q96R47 310 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 MTERF1Q99551 399 aaKnown RBP13.78□□□□□ -0.2
MSH5-206ENST00000423982 TPT1P8Q9HAU6 139 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 RAPGEFL1Q9UHV5 662 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 CRLS1Q9UJA2 301 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 FZD4Q9ULV1 537 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 CFAP20Q9Y6A4 193 aaKnown RBP13.78□□□□□ -0.2
MSH5-206ENST00000423982 KCNE1BA0A087WTH5 132 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 PRAMEF25A6NGN4 478 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 TNFRSF11BO00300 401 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 PCDH7O60245 1069 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 STC2O76061 302 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 TNFSF8P32971 234 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 RHOAP61586 193 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 PTCHD3Q3KNS1 767 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 ANGPTL8Q6UXH0 198 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 RFLNAQ6ZTI6 216 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 TSPAN33Q86UF1 283 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 UBQLNLQ8IYU4 475 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 VN1R2Q8NFZ6 395 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 ST6GAL2Q96JF0 529 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 SLC32A1Q9H598 525 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 FKBP14Q9NWM8 211 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 CCDC59Q9P031 241 aaKnown RBP13.78□□□□□ -0.2
MSH5-206ENST00000423982 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 WBP11Q9Y2W2 641 aaKnown RBP13.78□□□□□ -0.2
MSH5-206ENST00000423982 PCDHGA2Q9Y5H1 932 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 PEX16Q9Y5Y5 336 aa13.78□□□□□ -0.2
MSH5-206ENST00000423982 LINC01565O15544 149 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 SUV39H1O43463 412 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 FZD6O60353 706 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 MRPS14O60783 128 aaKnown RBP13.77□□□□□ -0.2
MSH5-206ENST00000423982 APOA1P02647 267 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 ANXA5P08758 320 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 BPIP17213 487 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 ACRV1P26436 265 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 RFX2P48378 723 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 SLAMF1Q13291 335 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 GAB1Q13480 694 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 DMC1Q14565 340 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 BAK1Q16611 211 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 C5orf22Q49AR2 442 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 SNAP47Q5SQN1 464 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 ZNF605Q86T29 641 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 VRK3Q8IV63 474 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 NAGSQ8N159 534 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 OR10G2Q8NGC3 310 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 DNAJB8Q8NHS0 232 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 GTPBP3Q969Y2 492 aaKnown RBP13.77□□□□□ -0.2
MSH5-206ENST00000423982 COPS8Q99627 209 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 SLC29A3Q9BZD2 475 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 MMP28Q9H239 520 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 FAM8A1Q9UBU6 413 aa13.77□□□□□ -0.2
MSH5-206ENST00000423982 GPX5O75715 221 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 HLA-EP13747 358 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 DEFA1P59665 94 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 DEFA3P59666 94 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 RAB30Q15771 203 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 ZNF852Q6ZMS4 543 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 UBE2J2Q8N2K1 259 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 SYNPOQ8N3V7 929 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 GPR151Q8TDV0 419 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 UBTD2Q8WUN7 234 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 PIH1D2Q8WWB5 315 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 CEP19Q96LK0 163 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 COL21A1Q96P44 957 aa13.77□□□□□ -0.21
MSH5-206ENST00000423982 TRNT1Q96Q11 434 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms