RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OR4K3Q96R72 315 aa15.15■□□□□ 0.02
COL18A1-205ENST00000423214 ZNF835Q9Y2P0 537 aa15.15■□□□□ 0.02
COL18A1-205ENST00000423214 PHF3Q92576 2039 aaKnown RBP15.15■□□□□ 0.02
COL18A1-205ENST00000423214 DCHS2Q6V1P9 2916 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 CDK2AP1O14519 115 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 NME2P1O60361 137 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 NEURL1O76050 574 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 WISP2O76076 250 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 CLDN14O95500 239 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 NME2P22392 152 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 TPP2P29144 1249 aaPredicted RBP15.14■□□□□ 0.01
COL18A1-205ENST00000423214 HNF4AP41235 474 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 CYB561P49447 251 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 CREG2Q8IUH2 290 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 EID3Q8N140 333 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 TRPV3Q8NET8 790 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 AIF1LQ9BQI0 150 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 SPNS1Q9H2V7 528 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 RHBGQ9H310 441 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 PELI2Q9HAT8 420 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 CHMP2BQ9UQN3 213 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 MEMO1Q9Y316 297 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 DNAJC13O75165 2243 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 HCFC1P51610 2035 aa15.14■□□□□ 0.01
COL18A1-205ENST00000423214 ZNF407Q9C0G0 2248 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 F8P00451 2351 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 ASNA1O43681 348 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 MAOAP21397 527 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 SCTRP47872 440 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 PGGT1BP53609 377 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 RAB8AP61006 207 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 RBBP5Q15291 538 aaKnown RBP15.13■□□□□ 0.01
COL18A1-205ENST00000423214 MSS51Q4VC12 460 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 PDIK1LQ8N165 341 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 CPSF7Q8N684 471 aaKnown RBP15.13■□□□□ 0.01
COL18A1-205ENST00000423214 UTP15Q8TED0 518 aaKnown RBP15.13■□□□□ 0.01
COL18A1-205ENST00000423214 MTFMTQ96DP5 389 aaKnown RBP15.13■□□□□ 0.01
COL18A1-205ENST00000423214 LURAP1Q96LR2 239 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 NAPGQ99747 312 aaPredicted RBP15.13■□□□□ 0.01
COL18A1-205ENST00000423214 OLFM1Q99784 485 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 DEFB126Q9BYW3 111 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 PRDM9Q9NQV7 894 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 SAR1BQ9Y6B6 198 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 PDZD2O15018 2839 aa15.13■□□□□ 0.01
COL18A1-205ENST00000423214 CCDC168Q8NDH2 2452 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 INTS1Q8N201 2190 aaKnown RBP15.12■□□□□ 0.01
COL18A1-205ENST00000423214 TCRBV16S1A1N1A0A5B0 115 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 PRRG2O14669 202 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 TFECO14948 347 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-205ENST00000423214 ZNF37AP17032 561 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-205ENST00000423214 ITGA8P53708 1063 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 BTG2P78543 158 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 HSF1Q00613 529 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 TOR1AIP1Q5JTV8 583 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 HP1BP3Q5SSJ5 553 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-205ENST00000423214 TEDDM1Q5T9Z0 273 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 SBSNQ6UWP8 590 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 FRA10AC1Q70Z53 315 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 THOC6Q86W42 341 aaKnown RBP15.12■□□□□ 0.01
COL18A1-205ENST00000423214 SIAH3Q8IW03 269 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 AGAP11Q8TF27 550 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 PWWP2AQ96N64 755 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 EGFL8Q99944 293 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 TRIM51Q9BSJ1 452 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 TRIM8Q9BZR9 551 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 SLC6A16Q9GZN6 736 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 CLK4Q9HAZ1 481 aaKnown RBP15.12■□□□□ 0.01
COL18A1-205ENST00000423214 ZFATQ9P243 1243 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 KLF13Q9Y2Y9 288 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-205ENST00000423214 VWA7Q9Y334 891 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 KCNE2Q9Y6J6 123 aa15.12■□□□□ 0.01
COL18A1-205ENST00000423214 NPEPPSL1A6NEC2 478 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 A8MUA0 341 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 FANCGO15287 622 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 DNAJB6O75190 326 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 SAT1P21673 171 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 IVDP26440 423 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 ELK3P41970 407 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 MEOX1P50221 254 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 MLF1P58340 268 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 STXBP1P61764 594 aaKnown RBP15.11■□□□□ 0.01
COL18A1-205ENST00000423214 ZNF468Q5VIY5 522 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-205ENST00000423214 NCCRP1Q6ZVX7 275 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-205ENST00000423214 IGDCC3Q8IVU1 814 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 ANKRD53Q8N9V6 530 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 POGLUT1Q8NBL1 392 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 SLCO2A1Q92959 643 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 FAR2Q96K12 515 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 POLQO75417 2590 aa15.11■□□□□ 0.01
COL18A1-205ENST00000423214 TACC2O95359 2948 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 IGKV3D-11A0A0A0MRZ8 115 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 TRBV11-1A0A0K0K1C0 115 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 MYO1DO94832 1006 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 SERPINA6P08185 405 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 SSTR2P30874 369 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 HLCSP50747 726 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 CLCN2P51788 898 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 DR1Q01658 176 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 MORF4L2Q15014 288 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 PPP1R3AQ16821 1122 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms