RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 LANCL3Q6ZV70 420 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 LRRC70Q7Z2Q7 622 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 VN1R5Q7Z5H4 357 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 ATCAYQ86WG3 371 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 IFT20Q8IY31 132 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC01840-201ENST00000421870 IQCKQ8N0W5 287 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 CLEC18CQ8NCF0 446 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 GALNT11Q8NCW6 608 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 ISL2Q96A47 359 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 SNRNP40Q96DI7 357 aaKnown RBP13.97□□□□□ -0.17
LINC01840-201ENST00000421870 MS4A6EQ96DS6 147 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 BARD1Q99728 777 aaKnown RBP13.97□□□□□ -0.17
LINC01840-201ENST00000421870 EFCAB11Q9BUY7 163 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 EPS8L2Q9H6S3 715 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 LUZP4Q9P127 313 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 C19orf25Q9UFG5 118 aaPredicted RBP13.97□□□□□ -0.17
LINC01840-201ENST00000421870 CSAG2Q9Y5P2 127 aa13.97□□□□□ -0.17
LINC01840-201ENST00000421870 PRRC2CQ9Y520 2896 aaKnown RBP13.97□□□□□ -0.17
LINC01840-201ENST00000421870 NBASA2RRP1 2371 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 ANKDD1BA6NHY2 528 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 SYCE1LA8MT33 242 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 C4orf51C9J302 202 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 K7EPI3 171 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 CCNT2O60583 730 aaKnown RBP13.96□□□□□ -0.17
LINC01840-201ENST00000421870 VPS4BO75351 444 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 CELA2AP08217 269 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 HNRNPH1P31943 449 aaKnown RBP13.96□□□□□ -0.17
LINC01840-201ENST00000421870 SERPINB8P50452 374 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 SERPINB9P50453 376 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 OLR1P78380 273 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 NSDHLQ15738 373 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 UAP1Q16222 522 aaPredicted RBP13.96□□□□□ -0.17
LINC01840-201ENST00000421870 TOR1AIP1Q5JTV8 583 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 MFSD4BQ5TF39 518 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 H3F3CQ6NXT2 135 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 LINC00696Q6ZRV3 163 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 CUZD1Q86UP6 607 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 AMER2Q8N7J2 671 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 SNX31Q8N9S9 440 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 DNAJB14Q8TBM8 379 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 BRIX1Q8TDN6 353 aaKnown RBP13.96□□□□□ -0.17
LINC01840-201ENST00000421870 UBTD2Q8WUN7 234 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 HAS2Q92819 552 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 NPLQ9BXD5 320 aaPredicted RBP13.96□□□□□ -0.17
LINC01840-201ENST00000421870 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 VPS4AQ9UN37 437 aa13.96□□□□□ -0.17
LINC01840-201ENST00000421870 IGHV3-20A0A0C4DH32 117 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 SUPT3HB4E1H0 165 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 SUPT3HO75486 399 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 INHBAP08476 426 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 ITGAMP11215 1152 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 RNH1P13489 461 aaKnown RBP13.95□□□□□ -0.18
LINC01840-201ENST00000421870 JAK1P23458 1154 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 CNTFP26441 200 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 HPDP32754 393 aaPredicted RBP13.95□□□□□ -0.18
LINC01840-201ENST00000421870 BTN3A2P78410 334 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 IRF8Q02556 426 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 CHIT1Q13231 466 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 RUNX2Q13950 521 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 NAA30Q147X3 362 aaPredicted RBP13.95□□□□□ -0.18
LINC01840-201ENST00000421870 ABRAXAS2Q15018 415 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 SETDB1Q15047 1291 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 PRR30Q53SZ7 412 aaPredicted RBP13.95□□□□□ -0.18
LINC01840-201ENST00000421870 PAGE2BQ5JRK9 111 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 QSOX2Q6ZRP7 698 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 LAS2Q8IYD9 372 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 CA13Q8N1Q1 262 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 PLD6Q8N2A8 252 aaKnown RBP13.95□□□□□ -0.18
LINC01840-201ENST00000421870 CISD2Q8N5K1 135 aaKnown RBP13.95□□□□□ -0.18
LINC01840-201ENST00000421870 OR2L5Q8NG80 312 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 M1APQ8TC57 530 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 DCAKDQ8WVC6 231 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 EXT2Q93063 718 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 GAL3ST3Q96A11 431 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 C19orf60Q96EN9 201 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 QRFPRQ96P65 431 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 PAFAH2Q99487 392 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 ILKAPQ9H0C8 392 aaPredicted RBP13.95□□□□□ -0.18
LINC01840-201ENST00000421870 PTGFRNQ9P2B2 879 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 OPTCQ9UBM4 332 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 NFU1Q9UMS0 254 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 PCDHGA10Q9Y5H3 936 aa13.95□□□□□ -0.18
LINC01840-201ENST00000421870 A0A087WUV0 522 aaPredicted RBP13.94□□□□□ -0.18
LINC01840-201ENST00000421870 FAM227AF5H4B4 570 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 PRMT3O60678 531 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 CDC123O75794 336 aaPredicted RBP13.94□□□□□ -0.18
LINC01840-201ENST00000421870 SEC24DO94855 1032 aaPredicted RBP13.94□□□□□ -0.18
LINC01840-201ENST00000421870 COL6A2P12110 1019 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 EPB42P16452 691 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 MSH2P43246 934 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 GLRBP48167 497 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 ALDH18A1P54886 795 aaKnown RBP13.94□□□□□ -0.18
LINC01840-201ENST00000421870 BTG2P78543 158 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 SRSF1Q07955 248 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC01840-201ENST00000421870 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC01840-201ENST00000421870 TLR1Q15399 786 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 EXT1Q16394 746 aa13.94□□□□□ -0.18
LINC01840-201ENST00000421870 HIST2H2ACQ16777 129 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms